C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytokine inducible SH2-containing protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085102 Cish-001 ENSMUSG00000032578 10090 + 9:107296026-107301987 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085102
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085102 1.105±0.48 1.740±0.37 2.611±0.42 0.393±0.00 6.257±1.15 4.122±0.81 4.338±0.00 4.883±1.29 2.455±1.69 4.482±2.04 3.058±1.61 3.986±1.28 0.740±0.40 0.488±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D8 CIL_0008D8_0002 VISTA 9:107005935-107609958
CIL_0006UP CIL_0006UP_0002 CGP 9:107296026-107338350

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0007205 IDA protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0009968 IEA negative regulation of signal transduction
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction
GO:0040008 IEA regulation of growth

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000348721 CISH-001 protein_coding Homo_sapiens 0 1092
ENST00000443053 CISH-002 protein_coding Homo_sapiens 0 1029
ENST00000446044 MAPKAPK3-002 protein_coding Homo_sapiens 9e-18 97
ENST00000491847 CISH-003 retained_intron Homo_sapiens 0 1029

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