C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HemK methyltransferase family member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118051 Hemk1-005 ENSMUSG00000032579 10090 - 9:107327991-107338332 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000118051
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000118051 8.663±0.75 4.804±0.00 5.029±0.00 11.793±5.10 5.984±0.00 6.027±0.26 7.072±1.06 4.818±0.24 6.228±0.00 7.489±0.83 7.582±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D8 CIL_0008D8_0002 VISTA 9:107005935-107609958
CIL_0006UP CIL_0006UP_0002 CGP 9:107296026-107338350

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000232854 HEMK1-003 protein_coding Homo_sapiens 0 353
ENST00000434410 HEMK1-001 protein_coding Homo_sapiens 0 353
ENST00000443894 HEMK1-007 protein_coding Homo_sapiens 0 257
ENST00000448997 HEMK1-004 nonsense_mediated_decay Homo_sapiens 3e-40 172
ENST00000455834 HEMK1-002 protein_coding Homo_sapiens 0 353

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