C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006YC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000086062-ENSG00000122711 CGP 9606 9:33104082-33248567
GeneTranscriptPositionBiotype
ENSG00000086062 (B4GALT1)
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 		ENST00000379731 (B4GALT1-001) 33110637-33167356 protein_coding
ENST00000535206 (B4GALT1-201) 33104082-33167356 protein_coding
ENSG00000107262 (BAG1)
BCL2-associated athanogene 		ENST00000379701 (BAG1-003) 33255025-33260441 retained_intron
ENST00000379704 (BAG1-001) 33255078-33264763 protein_coding
ENST00000379707 (BAG1-007) 33255049-33264677 nonsense_mediated_decay
ENST00000467389 (BAG1-008) 33255025-33260488 processed_transcript
ENST00000468274 (BAG1-009) 33255864-33257671 retained_intron
ENST00000472232 (BAG1-201) 33252477-33264761 protein_coding
ENST00000473464 (BAG1-005) 33257720-33259032 processed_transcript
ENST00000473781 (BAG1-011) 33258919-33264559 protein_coding
ENST00000488499 (BAG1-010) 33262741-33264670 protein_coding
ENST00000493917 (BAG1-006) 33247820-33256806 processed_transcript
ENSG00000122711 (SPINK4)
serine peptidase inhibitor, Kazal type 4 		ENST00000379721 (SPINK4-001) 33240164-33248567 protein_coding
ENST00000379725 (SPINK4-002) 33218365-33248552 protein_coding
CIL_0006YC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028413-ENSMUSG00000028415 CGP 10090 4:40804602-40931395
GeneTranscriptPositionBiotype
ENSMUSG00000028413 (B4galt1)
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 		ENSMUST00000030121 (B4galt1-001) 40804602-40854005 protein_coding
ENSMUST00000108096 (B4galt1-002) 40809154-40854005 protein_coding
ENSMUSG00000028415 (Spink4)
serine peptidase inhibitor, Kazal type 4 		ENSMUST00000030122 (Spink4-001) 40920052-40931395 protein_coding
ENSMUST00000132943 (Spink4-002) 40920054-40925044 processed_transcript
ENSMUSG00000081309 (Gm12397)
predicted gene 12397 		ENSMUST00000117674 (Gm12397-001) 40912741-40913355 processed_pseudogene
ENSMUSG00000094959 (Gm24112)
predicted gene, 24112 		ENSMUST00000179159 (Gm24112-201) 40850144-40850226 miRNA
ENSMUSG00000095871 (Gm25931)
predicted gene, 25931 		ENSMUST00000175230 (Gm25931-201) 40850320-40850402 miRNA
ENSMUSG00000096377 (Mir5123)
microRNA 5123 		ENSMUST00000177794 (Mir5123-201) 40850056-40850138 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006YC_0001ENSG00000086062ENST00000379731ENST00000535206ENSG00000107262ENST00000379701ENST00000379704ENST00000379707ENST00000467389ENST00000468274ENST00000472232ENST00000473464ENST00000473781ENST00000488499ENST00000493917ENSG00000122711ENST00000379721ENST00000379725CIL_0006YC_0002ENSMUSG00000028413ENSMUST00000030121ENSMUST00000108096ENSMUSG00000028415ENSMUST00000030122ENSMUST00000132943ENSMUSG00000081309ENSMUST00000117674ENSMUSG00000094959ENSMUST00000179159ENSMUSG00000095871ENSMUST00000175230ENSMUSG00000096377ENSMUST00000177794
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006YC_0001ENSG00000086062ENST00000379731ENSG00000107262ENST00000379701ENST00000379704ENST00000379707ENST00000472232ENST00000473781ENSG00000122711ENST00000379721CIL_0006YC_0002ENSMUSG00000028413ENSMUST00000030121ENSMUST00000108096ENSMUSG00000028415ENSMUST00000030122ENSMUST00000132943ENSMUSG00000081309ENSMUST00000117674ENSMUSG00000094959ENSMUST00000179159ENSMUSG00000095871ENSMUST00000175230ENSMUSG00000096377ENSMUST00000177794
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000086062 ENST00000379731 45.408±0.00 14.577±0.00 7.121±0.00 1.745±1.27 14.825±3.35 13.161±2.74 9.696±7.58 21.965±8.48 20.499±18.62 32.771±23.52 5.579±3.41 30.387±17.73 28.598±12.97 24.228±11.54
ENST00000535206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000107262 ENST00000379701 N/A N/A 1.019±0.00 N/A N/A N/A N/A N/A 2.158±0.00 N/A N/A N/A N/A N/A
ENST00000379704 44.081±0.00 32.371±0.00 4.249±0.00 31.059±21.21 23.156±20.18 38.974±35.17 32.342±28.04 47.174±36.35 16.308±7.76 38.663±34.71 47.903±30.26 31.335±17.44 44.391±6.30 72.840±5.12
ENST00000379707 12.853±0.00 14.388±0.00 N/A N/A 10.390±8.13 N/A 9.988±0.00 N/A N/A N/A 13.104±0.00 3.327±2.30 N/A 27.756±2.01
ENST00000467389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472232 N/A 1.910±0.00 0.925±0.00 0.728±0.00 1.994±0.00 0.717±0.00 N/A 3.794±0.00 1.043±0.07 1.896±1.17 0.989±0.00 3.616±2.38 3.054±1.50 N/A
ENST00000473464 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473781 N/A N/A 2.872±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000122711 ENST00000379721 N/A N/A N/A 0.164±0.00 51.511±0.00 20.360±5.00 N/A N/A 0.461±0.00 N/A N/A 1.822±1.10 N/A N/A
ENST00000379725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028413 ENSMUST00000030121 24.571±4.67 29.859±4.94 28.532±1.07 1.226±0.72 28.875±3.26 32.854±2.25 19.470±1.26 11.130±0.33 14.694±2.27 28.452±2.67 6.292±0.77 32.824±10.71 35.394±12.54 4.420±1.86
ENSMUST00000108096 N/A 52.736±15.18 N/A N/A 10.160±0.56 10.426±0.00 N/A N/A N/A N/A N/A 33.762±15.98 N/A N/A
ENSMUSG00000028415 ENSMUST00000030122 0.464±0.16 5.394±1.85 0.131±0.00 N/A 0.302±0.17 3178.863±1163.79 1.009±0.31 1.219±0.31 0.635±0.27 14.107±8.81 N/A 7.779±4.54 0.305±0.07 3.449±1.61
ENSMUST00000132943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.861±0.00 N/A 1.486±0.27 N/A
ENSMUSG00000081309 ENSMUST00000117674 1.833±0.58 0.449±0.12 0.499±0.03 4.954±2.74 2.171±0.53 0.689±0.24 0.415±0.16 0.633±0.48 0.601±0.55 1.339±0.29 0.142±0.06 2.129±1.30 0.562±0.08 1.530±0.18
ENSMUSG00000094959 ENSMUST00000179159 N/A N/A N/A N/A 20592.267±5529.88 30684.551±3093.05 16926.333±4447.39 N/A N/A 17939.400±7230.50 N/A 41577.700±27476.54 N/A N/A
ENSMUSG00000095871 ENSMUST00000175230 11255.604±3259.31 12639.000±516.20 N/A N/A 23397.600±0.00 50186.898±0.00 11083.100±0.00 N/A N/A 10101.210±1503.69 N/A 29421.550±14642.37 N/A N/A
ENSMUSG00000096377 ENSMUST00000177794 N/A N/A N/A N/A N/A 13173.800±0.00 N/A N/A 18461.199±0.00 N/A N/A 28439.199±6060.70 N/A N/A

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