C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379731 B4GALT1-001 ENSG00000086062 9606 - 9:33110637-33167356 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379731
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379731 45.408±0.00 14.577±0.00 7.121±0.00 1.745±1.27 14.825±3.35 13.161±2.74 9.696±7.58 21.965±8.48 20.499±18.62 32.771±23.52 5.579±3.41 30.387±17.73 28.598±12.97 24.228±11.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061E CIL_00061E_0001 CGP 9:33041764-33167356
CIL_0006YC CIL_0006YC_0001 CGP 9:33104082-33248567

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000138 IDA Golgi trans cisterna
GO:0000139 TAS Golgi membrane
GO:0002064 IEA epithelial cell development
GO:0002526 IEA acute inflammatory response
GO:0003831 IDA beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0003945 IDA N-acetyllactosamine synthase activity
GO:0004461 IDA lactose synthase activity
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005794 IDA Golgi apparatus
GO:0005886 TAS plasma membrane
GO:0005975 TAS carbohydrate metabolic process
GO:0005989 IEA lactose biosynthetic process
GO:0006012 IEA galactose metabolic process
GO:0006486 IEA protein glycosylation
GO:0006487 IDA protein N-linked glycosylation
GO:0007155 IEA cell adhesion
GO:0007219 TAS Notch signaling pathway
GO:0007338 TAS single fertilization
GO:0007339 TAS binding of sperm to zona pellucida
GO:0007341 IEA penetration of zona pellucida
GO:0008092 IEA cytoskeletal protein binding
GO:0008285 IEA negative regulation of cell proliferation
GO:0008378 NAS galactosyltransferase activity
GO:0009101 IEA glycoprotein biosynthetic process
GO:0009312 IDA oligosaccharide biosynthetic process
GO:0009897 IDA external side of plasma membrane
GO:0009986 IEA cell surface
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016323 IDA basolateral plasma membrane
GO:0018146 TAS keratan sulfate biosynthetic process
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0030057 IDA desmosome
GO:0030112 IDA glycocalyx
GO:0030145 IDA manganese ion binding
GO:0030198 IEA extracellular matrix organization
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030879 IEA mammary gland development
GO:0031526 IDA brush border membrane
GO:0032504 TAS multicellular organism reproduction
GO:0035250 IDA UDP-galactosyltransferase activity
GO:0042060 IEA wound healing
GO:0042127 IEA regulation of cell proliferation
GO:0042339 TAS keratan sulfate metabolic process
GO:0042803 IDA protein homodimerization activity
GO:0043014 IDA alpha-tubulin binding
GO:0043065 IEA positive regulation of apoptotic process
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045136 IEA development of secondary sexual characteristics
GO:0048487 IPI beta-tubulin binding
GO:0048754 IEA branching morphogenesis of an epithelial tube
GO:0050900 IEA leukocyte migration
GO:0051270 IEA regulation of cellular component movement
GO:0060046 IEA regulation of acrosome reaction
GO:0060054 IEA positive regulation of epithelial cell proliferation involved in wound healing
GO:0060055 IEA angiogenesis involved in wound healing
GO:0060058 IEA positive regulation of apoptotic process involved in mammary gland involution
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030121 B4galt1-001 protein_coding Mus_musculus 0 1520
ENSMUST00000108096 B4galt1-002 protein_coding Mus_musculus 0 1110
ENSDART00000149913 b4galt1-001 protein_coding Danio_rerio 1e-22 113

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