C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00073W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000022160-ENSDARG00000062350 CGP 7955 18:20606129-20649886
GeneTranscriptPositionBiotype
ENSDARG00000022160 (ttc23)
tetratricopeptide repeat domain 23 		ENSDART00000090100 (ttc23-201) 20606292-20634087 protein_coding
ENSDART00000138692 (ttc23-001) 20619497-20634459 protein_coding
ENSDART00000141686 (ttc23-002) 20606129-20609160 protein_coding
ENSDART00000146751 (ttc23-003) 20606129-20608832 protein_coding
ENSDARG00000062350 (synm)
synemin, intermediate filament protein 		ENSDART00000090079 (synm-001) 20640372-20649886 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00073W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030555-ENSMUSG00000030554 CGP 10090 7:67647410-67759742
GeneTranscriptPositionBiotype
ENSMUSG00000030554 (Synm)
synemin, intermediate filament protein 		ENSMUST00000051389 (Synm-201) 67730161-67759742 protein_coding
ENSMUST00000074233 (Synm-202) 67730161-67759742 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00073W_0001ENSDARG00000022160ENSDART00000090100ENSDART00000138692ENSDART00000141686ENSDART00000146751ENSDARG00000062350ENSDART00000090079CIL_00073W_0002ENSMUSG00000030554ENSMUST00000051389ENSMUST00000074233
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00073W_0001ENSDARG00000022160ENSDART00000090100ENSDART00000138692ENSDART00000141686ENSDARG00000062350ENSDART00000090079CIL_00073W_0002ENSMUSG00000030554ENSMUST00000051389ENSMUST00000074233
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000022160 ENSDART00000090100 N/A N/A N/A 0.463±0.32 N/A N/A 2.231±2.16 0.513±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000138692 N/A N/A N/A 0.707±0.00 N/A N/A 0.163±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141686 N/A N/A N/A 0.625±0.19 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000146751 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000062350 ENSDART00000090079 N/A N/A N/A 1.552±0.00 N/A N/A 12.873±12.09 0.919±0.70 0.098±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030554 ENSMUST00000051389 2.863±1.59 1.075±0.31 105.335±13.22 3.547±2.67 5.763±4.98 15.536±4.01 0.995±0.08 0.426±0.08 0.050±0.03 5.764±0.74 91.034±39.47 5.329±2.95 0.560±0.84 1.551±0.43
ENSMUST00000074233 1.587±0.61 1.029±0.15 36.855±8.61 0.854±0.58 1.069±0.47 8.508±0.97 0.429±0.12 0.272±0.07 0.085±0.06 3.210±0.26 N/A 2.568±1.32 0.348±0.49 0.891±0.37

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