C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00075V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079491-ENSDARG00000002241 CGP 7955 6:49307801-49359589
GeneTranscriptPositionBiotype
ENSDARG00000002241 (KCNA2 (1 of 2))
potassium voltage-gated channel, shaker-related subfamily, member 2
ENSDART00000027398 (KCNA2 (1 of 2)-201) 49358025-49359589 protein_coding
ENSDARG00000079491 (KCNA3 (2 of 2))
potassium voltage-gated channel, shaker-related subfamily, member 3
ENSDART00000109628 (KCNA3 (2 of 2)-201) 49307801-49309252 protein_coding
CIL_00075V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047959-ENSMUSG00000040724 CGP 10090 3:107036162-107106879
GeneTranscriptPositionBiotype
ENSMUSG00000040724 (Kcna2)
potassium voltage-gated channel, shaker-related subfamily, member 2
ENSMUST00000038695 (Kcna2-201) 107101567-107106879 protein_coding
ENSMUSG00000047959 (Kcna3)
potassium voltage-gated channel, shaker-related subfamily, member 3
ENSMUST00000052718 (Kcna3-201) 107036162-107038129 protein_coding
ENSMUSG00000050179 (A930002I21Rik)
RIKEN cDNA A930002I21 gene
ENSMUST00000060946 (A930002I21Rik-001) 107090880-107098401 lincRNA
ENSMUST00000182132 (A930002I21Rik-002) 107090882-107097220 lincRNA
ENSMUSG00000056145 (AI504432)
expressed sequence AI504432
ENSMUST00000070085 (AI504432-001) 107039504-107054347 lincRNA
ENSMUSG00000098108 (Gm27008)
predicted gene, 27008
ENSMUST00000182400 (Gm27008-001) 106934382-107091802 antisense
ENSMUST00000182414 (Gm27008-002) 106949465-107093894 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00075V_0001ENSDARG00000002241ENSDART00000027398ENSDARG00000079491ENSDART00000109628CIL_00075V_0002ENSMUSG00000040724ENSMUST00000038695ENSMUSG00000047959ENSMUST00000052718ENSMUSG00000050179ENSMUST00000060946ENSMUST00000182132ENSMUSG00000056145ENSMUST00000070085ENSMUSG00000098108ENSMUST00000182400ENSMUST00000182414
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00075V_0001ENSDARG00000002241ENSDART00000027398ENSDARG00000079491ENSDART00000109628CIL_00075V_0002ENSMUSG00000040724ENSMUST00000038695ENSMUSG00000047959ENSMUST00000052718ENSMUSG00000050179ENSMUST00000060946ENSMUST00000182132ENSMUSG00000056145ENSMUST00000070085ENSMUSG00000098108ENSMUST00000182400ENSMUST00000182414
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002241 ENSDART00000027398 N/A N/A N/A 1.423±0.76 N/A N/A N/A N/A N/A N/A 0.239±0.00 N/A N/A N/A
ENSDARG00000079491 ENSDART00000109628 N/A N/A N/A 7.677±7.33 N/A N/A N/A N/A 0.060±0.00 N/A 0.525±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040724 ENSMUST00000038695 0.212±0.07 0.229±0.03 N/A 5.039±4.83 0.476±0.31 0.429±0.33 0.441±0.03 0.118±0.03 0.182±0.13 0.346±0.17 0.183±0.08 0.526±0.14 0.032±0.03 0.164±0.00
ENSMUSG00000047959 ENSMUST00000052718 0.335±0.16 0.489±0.09 0.109±0.01 2.837±1.36 6.106±2.36 0.772±0.08 0.285±0.19 0.342±0.16 0.272±0.23 4.070±2.48 0.045±0.02 0.502±0.22 0.117±0.06 0.102±0.04
ENSMUSG00000050179 ENSMUST00000060946 N/A N/A N/A 0.012±0.00 0.331±0.20 0.061±0.02 N/A 0.038±0.00 0.029±0.00 0.030±0.00 0.024±0.00 N/A N/A N/A
ENSMUST00000182132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.381±0.00
ENSMUSG00000056145 ENSMUST00000070085 0.078±0.04 0.070±0.00 0.181±0.03 4.117±1.57 0.870±0.38 0.149±0.09 0.119±0.05 0.098±0.06 0.625±0.27 1.903±0.24 0.048±0.09 0.116±0.06 0.110±0.04 0.024±0.01
ENSMUSG00000098108 ENSMUST00000182400 N/A N/A N/A 0.313±0.23 N/A N/A N/A N/A 0.007±0.00 0.057±0.00 0.034±0.00 0.021±0.00 N/A 0.116±0.04
ENSMUST00000182414 N/A N/A N/A 0.060±0.00 N/A N/A N/A 0.078±0.00 0.014±0.00 N/A N/A N/A N/A 0.133±0.11

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