C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, shaker-related subfamily, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038695 Kcna2-201 ENSMUSG00000040724 10090 + 3:107101567-107106879 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038695
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038695 0.212±0.07 0.229±0.03 5.039±4.83 0.476±0.31 0.429±0.33 0.441±0.03 0.118±0.03 0.182±0.13 0.346±0.17 0.183±0.08 0.526±0.14 0.032±0.03 0.164±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075V CIL_00075V_0002 CGP 3:107036162-107106879
CIL_0005E4 CIL_0005E4_0002 CGP 3:107101567-107195721

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0005515 IPI protein binding
GO:0008076 IDA voltage-gated potassium channel complex
GO:0015271 IEA outward rectifier potassium channel activity
GO:0021633 IMP optic nerve structural organization
GO:0034765 IEA regulation of ion transmembrane transport
GO:0044224 IDA juxtaparanode region of axon
GO:0051259 IEA protein oligomerization
GO:0051260 IEA protein homooligomerization
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000131038 protein_coding Danio_rerio 0 459
ENST00000316361 KCNA2-003 protein_coding Homo_sapiens 0 2562
ENST00000328224 KCNA4-001 protein_coding Homo_sapiens 0 366
ENST00000369770 KCNA2-001 protein_coding Homo_sapiens 0 1598
ENST00000485317 KCNA2-002 protein_coding Homo_sapiens 0 3707
ENST00000525120 KCNA2-004 processed_transcript Homo_sapiens 1e-39 167

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