C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: potassium voltage-gated channel, shaker-related subfamily, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000109628 KCNA3 (2 of 2)-201 ENSDARG00000079491 7955 + 6:49307801-49309252 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleENSDART00000109628
Transcript ID Brain Liver Muscle
ENSDART00000109628 7.677±7.33 0.060±0.00 0.525±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075V CIL_00075V_0001 CGP 6:49307801-49359589

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005515 IEA protein binding
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0051260 IEA protein homooligomerization
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000040751 Kcna6-001 nonsense_mediated_decay Mus_musculus 3e-40 172
ENSMUST00000055064 Kcna10-001 protein_coding Mus_musculus 0 353
ENSMUST00000055168 Kcna1-201 protein_coding Mus_musculus 0 739
ENSMUST00000112242 Kcna6-003 protein_coding Mus_musculus 2e-40 172
ENSMUST00000185333 Kcna6-201 protein_coding Mus_musculus 3e-40 172
ENST00000369769 KCNA3-001 protein_coding Homo_sapiens 0 388
ENST00000382545 KCNA1-001 protein_coding Homo_sapiens 0 778

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