C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, shaker-related subfamily, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052718 Kcna3-201 ENSMUSG00000047959 10090 + 3:107036162-107038129 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052718
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052718 0.335±0.16 0.489±0.09 0.109±0.01 2.837±1.36 6.106±2.36 0.772±0.08 0.285±0.19 0.342±0.16 0.272±0.23 4.070±2.48 0.045±0.02 0.502±0.22 0.117±0.06 0.102±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075V CIL_00075V_0002 CGP 3:107036162-107106879

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0005886 IEA plasma membrane
GO:0008076 IEA voltage-gated potassium channel complex
GO:0015271 IEA outward rectifier potassium channel activity
GO:0034765 IEA regulation of ion transmembrane transport
GO:0045121 IEA membrane raft
GO:0051260 IEA protein homooligomerization
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000111055 KCNA4-201 protein_coding Danio_rerio 0 298
ENSDART00000131038 protein_coding Danio_rerio 0 296
ENSDART00000009653 KCNA1A-201 protein_coding Danio_rerio 0 243
ENST00000252321 KCNA5-001 protein_coding Homo_sapiens 0 383
ENST00000280684 KCNA6-001 protein_coding Homo_sapiens 0 409
ENST00000316361 KCNA2-003 protein_coding Homo_sapiens 0 512
ENST00000369769 KCNA3-001 protein_coding Homo_sapiens 0 2204
ENST00000369771 KCNA10-001 protein_coding Homo_sapiens 0 377
ENST00000382545 KCNA1-001 protein_coding Homo_sapiens 0 481
ENST00000433855 GALNT8-201 protein_coding Homo_sapiens 0 409
ENST00000485317 KCNA2-002 protein_coding Homo_sapiens 0 512

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