C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, catalytic subunit, beta isozyme
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000395366 PPP1CB-001 ENSG00000213639 9606 + 2:28751853-28802940 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000395366
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000395366 22.762±0.00 22.206±0.00 3.975±0.00 18.586±0.00 18.547±13.22 19.934±9.52 17.015±8.31 17.011±0.00 16.882±14.36 13.238±5.54 29.851±18.47 11.791±6.60 3.659±1.55 26.774±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013Q CIL_00013Q_0001 CGP 2:28457145-28802940

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000164 IEA protein phosphatase type 1 complex
GO:0000278 TAS mitotic cell cycle
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0004722 IEA protein serine/threonine phosphatase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0005925 IDA focal adhesion
GO:0005977 IEA glycogen metabolic process
GO:0005979 IEA regulation of glycogen biosynthetic process
GO:0005981 IEA regulation of glycogen catabolic process
GO:0006470 ISS protein dephosphorylation
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0016787 IEA hydrolase activity
GO:0016791 ISS phosphatase activity
GO:0017018 ISS myosin phosphatase activity
GO:0019433 TAS triglyceride catabolic process
GO:0019901 IPI protein kinase binding
GO:0030155 IDA regulation of cell adhesion
GO:0030512 TAS negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032922 ISS circadian regulation of gene expression
GO:0042587 IEA glycogen granule
GO:0042752 IMP regulation of circadian rhythm
GO:0043153 ISS entrainment of circadian clock by photoperiod
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0050115 IDA myosin-light-chain-phosphatase activity
GO:0051301 IEA cell division
GO:0070062 IDA extracellular vesicular exosome
GO:0070688 IDA MLL5-L complex
GO:0072357 IDA PTW/PP1 phosphatase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015100 Ppp1cb-001 protein_coding Mus_musculus 0 2937
ENSMUST00000131300 Ppp1cb-002 nonsense_mediated_decay Mus_musculus 0 1934
ENSMUST00000133568 Ppp1cb-003 processed_transcript Mus_musculus 0 667
ENSMUST00000180575 PPP1CA-201 protein_coding Mus_musculus 0 496
ENSMUST00000046094 Ppp1ca-201 protein_coding Mus_musculus 0 496

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