C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, catalytic subunit, beta isozyme
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000296122 PPP1CB-003 ENSG00000213639 9606 + 2:28751814-28801648 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296122
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296122 34.901±0.00 11.961±0.00 9.889±0.00 29.893±5.89 30.808±0.10 45.878±6.78 34.456±1.83 27.574±12.46 37.531±30.03 36.456±2.12 59.227±43.69 34.554±14.45 19.557±15.35 39.490±9.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013Q CIL_00013Q_0001 CGP 2:28457145-28802940

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005925 IDA focal adhesion
GO:0005977 IEA glycogen metabolic process
GO:0006470 ISS protein dephosphorylation
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0016787 IEA hydrolase activity
GO:0016791 ISS phosphatase activity
GO:0017018 ISS myosin phosphatase activity
GO:0019433 TAS triglyceride catabolic process
GO:0019901 IPI protein kinase binding
GO:0030155 IDA regulation of cell adhesion
GO:0030512 TAS negative regulation of transforming growth factor beta receptor signaling pathway
GO:0032922 ISS circadian regulation of gene expression
GO:0042752 IMP regulation of circadian rhythm
GO:0043153 ISS entrainment of circadian clock by photoperiod
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0050115 IDA myosin-light-chain-phosphatase activity
GO:0051301 IEA cell division
GO:0070062 IDA extracellular vesicular exosome
GO:0070688 IDA MLL5-L complex
GO:0072357 IDA PTW/PP1 phosphatase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015100 Ppp1cb-001 protein_coding Mus_musculus 0 2756
ENSMUST00000131300 Ppp1cb-002 nonsense_mediated_decay Mus_musculus 0 1796
ENSMUST00000133568 Ppp1cb-003 processed_transcript Mus_musculus 0 667
ENSMUST00000180575 PPP1CA-201 protein_coding Mus_musculus 0 496
ENSMUST00000046094 Ppp1ca-201 protein_coding Mus_musculus 0 496

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