C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007F8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000005942-ENSDARG00000008140 CGP 7955 18:32452939-32795774
GeneTranscriptPositionBiotype
ENSDARG00000005942 (v2rl1)
vomeronasal 2 receptor, l1 		ENSDART00000027938 (v2rl1-201) 32452939-32469977 protein_coding
ENSDART00000126115 (v2rl1-001) 32452939-32469977 protein_coding
ENSDARG00000008140 (kcnab1)
potassium voltage-gated channel, shaker-related subfamily, beta member 1 		ENSDART00000059394 (kcnab1-201) 32738666-32795774 protein_coding
ENSDART00000131478 (kcnab1-001) 32590027-32795281 protein_coding
CIL_0007F8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062200-ENSMUSG00000027827 CGP 10090 3:64690660-65378223
GeneTranscriptPositionBiotype
ENSMUSG00000027827 (Kcnab1)
potassium voltage-gated channel, shaker-related subfamily, beta member 1 		ENSMUST00000049230 (Kcnab1-001) 65109384-65378219 protein_coding
ENSMUST00000159525 (Kcnab1-004) 65109384-65365788 protein_coding
ENSMUST00000160136 (Kcnab1-006) 65297414-65357085 protein_coding
ENSMUST00000161404 (Kcnab1-002) 65188103-65378223 protein_coding
ENSMUST00000161956 (Kcnab1-005) 65353767-65358820 processed_transcript
ENSMUST00000161979 (Kcnab1-003) 65253428-65377084 protein_coding
ENSMUSG00000062200 (Vmn2r7)
vomeronasal 2, receptor 7 		ENSMUST00000050123 (Vmn2r7-002) 64715707-64844765 retained_intron
ENSMUST00000161972 (Vmn2r7-001) 64690660-64844765 protein_coding
ENSMUST00000168072 (Vmn2r7-201) 64690660-64719602 protein_coding
ENSMUSG00000090120 (A730090N16Rik)
RIKEN cDNA A730090N16 gene 		ENSMUST00000160137 (A730090N16Rik-001) 65324776-65349429 antisense
ENSMUSG00000093474 (Vmn2r-ps12)
vomeronasal 2, receptor, pseudogene 12 		ENSMUST00000175833 (Vmn2r-ps12-001) 64744749-64745645 unprocessed_pseudogene
ENSMUSG00000097538 (Gm26939)
predicted gene, 26939 		ENSMUST00000177146 (Gm26939-001) 64632863-64844743 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007F8_0001ENSDARG00000005942ENSDART00000027938ENSDART00000126115ENSDARG00000008140ENSDART00000059394ENSDART00000131478CIL_0007F8_0002ENSMUSG00000027827ENSMUST00000049230ENSMUST00000159525ENSMUST00000160136ENSMUST00000161404ENSMUST00000161956ENSMUST00000161979ENSMUSG00000062200ENSMUST00000050123ENSMUST00000161972ENSMUST00000168072ENSMUSG00000090120ENSMUST00000160137ENSMUSG00000093474ENSMUST00000175833ENSMUSG00000097538ENSMUST00000177146
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007F8_0001ENSDARG00000005942ENSDART00000027938ENSDART00000126115ENSDARG00000008140ENSDART00000059394ENSDART00000131478CIL_0007F8_0002ENSMUSG00000027827ENSMUST00000049230ENSMUST00000159525ENSMUST00000160136ENSMUST00000161404ENSMUST00000161956ENSMUST00000161979ENSMUSG00000062200ENSMUST00000050123ENSMUST00000161972ENSMUST00000168072ENSMUSG00000090120ENSMUST00000160137ENSMUSG00000093474ENSMUST00000175833ENSMUSG00000097538ENSMUST00000177146
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005942 ENSDART00000027938 N/A N/A N/A 0.027±0.00 N/A N/A 0.043±0.00 0.022±0.00 0.035±0.00 N/A N/A N/A N/A N/A
ENSDART00000126115 N/A N/A N/A 0.031±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000008140 ENSDART00000059394 N/A N/A N/A 1.702±0.00 N/A N/A 0.605±0.55 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000131478 N/A N/A N/A 4.237±0.00 N/A N/A 0.146±0.00 0.128±0.10 N/A N/A 0.300±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027827 ENSMUST00000049230 0.867±0.55 0.300±0.18 0.398±0.00 6.960±8.50 N/A 0.287±0.15 N/A 0.081±0.02 0.064±0.02 0.112±0.03 0.615±0.31 2.258±1.09 0.097±0.02 N/A
ENSMUST00000159525 N/A 0.268±0.10 N/A 8.271±0.00 N/A 0.151±0.00 N/A N/A 0.033±0.00 0.058±0.03 N/A 0.773±0.00 0.098±0.02 N/A
ENSMUST00000160136 0.529±0.00 0.881±0.00 N/A N/A 0.481±0.38 N/A 0.876±0.23 0.519±0.00 N/A N/A N/A 4.465±0.12 N/A N/A
ENSMUST00000161404 N/A N/A 0.328±0.00 N/A 0.245±0.12 N/A 0.392±0.02 0.158±0.07 0.092±0.06 0.254±0.10 0.440±0.00 0.735±0.00 0.207±0.14 0.726±0.00
ENSMUST00000161956 N/A 0.055±0.00 N/A N/A 0.046±0.03 0.061±0.04 N/A 0.024±0.00 0.037±0.02 0.060±0.01 N/A N/A 0.070±0.03 N/A
ENSMUST00000161979 0.276±0.00 N/A N/A N/A 0.194±0.13 N/A N/A 0.208±0.10 N/A 0.109±0.00 N/A 1.834±0.76 N/A 1.834±0.09
ENSMUSG00000062200 ENSMUST00000050123 N/A N/A N/A 0.003±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.686±1.88
ENSMUST00000161972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.401±0.00
ENSMUST00000168072 N/A N/A N/A N/A N/A N/A N/A N/A 0.000±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000090120 ENSMUST00000160137 0.088±0.01 N/A 0.059±0.00 0.171±0.00 0.092±0.01 0.145±0.00 N/A N/A 0.096±0.04 N/A 0.107±0.04 0.352±0.13 0.524±0.30 1.476±0.00
ENSMUSG00000093474 ENSMUST00000175833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.00
ENSMUSG00000097538 ENSMUST00000177146 N/A N/A N/A 0.003±0.00 N/A N/A N/A N/A N/A N/A N/A 0.009±0.00 0.035±0.00 N/A

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