C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007G8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000086589-ENSDARG00000046143 CGP 7955 8:41616553-41656382
GeneTranscriptPositionBiotype
ENSDARG00000046143 (prkab1b)
protein kinase, AMP-activated, beta 1 non-catalytic subunit, b
ENSDART00000040330 (prkab1b-001) 41627438-41656335 protein_coding
ENSDART00000045529 (prkab1b-201) 41627438-41656382 protein_coding
ENSDART00000126301 (prkab1b-003) 41627353-41655936 protein_coding
ENSDARG00000086589 (BX005328.1)
Uncharacterized protein
ENSDART00000125880 (BX005328.1-201) 41616553-41625475 protein_coding
CIL_0007G8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000224982-ENSG00000111725 CGP 9606 12:119593459-119681630
GeneTranscriptPositionBiotype
ENSG00000111725 (PRKAB1)
protein kinase, AMP-activated, beta 1 non-catalytic subunit
ENST00000229328 (PRKAB1-001) 119667753-119681630 protein_coding
ENST00000537057 (PRKAB1-004) 119680078-119681587 processed_transcript
ENST00000537400 (PRKAB1-007) 119668150-119672427 nonsense_mediated_decay
ENST00000538271 (PRKAB1-009) 119678985-119679981 retained_intron
ENST00000540121 (PRKAB1-005) 119669424-119680841 protein_coding
ENST00000541640 (PRKAB1-002) 119667864-119681624 protein_coding
ENST00000542698 (PRKAB1-003) 119677355-119681619 retained_intron
ENST00000545223 (PRKAB1-006) 119672244-119679951 protein_coding
ENST00000545870 (PRKAB1-008) 119673810-119680001 retained_intron
ENSG00000224982 (TMEM233)
transmembrane protein 233
ENST00000426426 (TMEM233-001) 119593459-119643066 protein_coding
ENST00000453450 (TMEM233-002) 119593914-119640813 processed_transcript
ENSG00000252886 (RN7SKP197)
RNA, 7SK small nuclear pseudogene 197
ENST00000517077 (RN7SKP197-201) 119631090-119631386 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007G8_0001ENSDARG00000046143ENSDART00000040330ENSDART00000045529ENSDART00000126301ENSDARG00000086589ENSDART00000125880CIL_0007G8_0002ENSG00000111725ENST00000229328ENST00000537057ENST00000537400ENST00000538271ENST00000540121ENST00000541640ENST00000542698ENST00000545223ENST00000545870ENSG00000224982ENST00000426426ENST00000453450ENSG00000252886ENST00000517077
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007G8_0001ENSDARG00000046143ENSDART00000040330ENSDART00000045529ENSDART00000126301ENSDARG00000086589ENSDART00000125880CIL_0007G8_0002ENSG00000111725ENST00000229328ENST00000537057ENST00000540121ENST00000541640ENST00000542698ENST00000545223ENST00000545870ENSG00000224982ENST00000426426ENST00000453450ENSG00000252886ENST00000517077
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000046143 ENSDART00000040330 N/A N/A N/A 7.047±3.76 N/A N/A 21.567±2.50 22.842±0.00 2.801±0.00 N/A 3.493±0.00 N/A N/A N/A
ENSDART00000045529 N/A N/A N/A 2.091±0.12 N/A N/A 90.154±19.67 88.593±18.26 N/A N/A N/A N/A N/A N/A
ENSDART00000126301 N/A N/A N/A 13.486±5.84 N/A N/A 35.170±2.80 46.203±0.00 3.688±0.00 N/A 5.292±0.00 N/A N/A N/A
ENSDARG00000086589 ENSDART00000125880 N/A N/A N/A 0.430±0.00 N/A N/A N/A 0.417±0.00 N/A N/A 25.813±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111725 ENST00000229328 20.722±0.00 9.013±0.00 2.750±0.00 6.859±4.81 3.876±2.17 4.990±2.96 1.552±1.35 19.155±0.00 1.046±0.48 4.758±3.10 0.764±0.54 9.127±5.90 16.653±5.13 15.201±0.00
ENST00000537057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.178±0.00 14.822±0.00 20.751±0.00
ENST00000537400 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540121 N/A N/A N/A N/A N/A N/A N/A 0.404±0.00 N/A N/A N/A N/A N/A N/A
ENST00000541640 N/A 3.248±0.00 N/A N/A 1.296±0.00 3.497±0.00 N/A 13.457±0.00 N/A 6.402±0.00 3.020±0.00 3.370±0.08 6.444±3.25 5.817±0.00
ENST00000542698 N/A 2.100±0.00 1.129±0.00 1.196±0.00 0.715±0.16 1.925±0.00 0.065±0.00 3.102±0.00 0.241±0.00 0.719±0.00 N/A 1.633±0.32 N/A N/A
ENST00000545223 N/A N/A 10.452±0.00 N/A N/A 5.121±0.00 0.600±0.00 N/A 1.146±0.00 N/A N/A N/A N/A N/A
ENST00000545870 N/A N/A N/A N/A 4.122±0.00 N/A N/A 1.459±0.00 1.611±0.00 N/A 0.884±0.00 5.415±0.00 N/A N/A
ENSG00000224982 ENST00000426426 0.282±0.00 0.336±0.00 0.089±0.00 0.713±0.60 0.804±0.00 0.214±0.16 0.110±0.00 0.435±0.00 0.188±0.00 0.362±0.00 3.665±2.61 0.311±0.22 0.061±0.03 0.166±0.03
ENST00000453450 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.878±0.00 N/A N/A 0.076±0.00 N/A
ENSG00000252886 ENST00000517077 N/A N/A N/A 0.163±0.00 N/A N/A N/A N/A N/A N/A 3.046±0.00 N/A N/A 0.142±0.00

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