C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007ID_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042780-ENSDARG00000079796 CGP 7955 17:30763178-30876340
GeneTranscriptPositionBiotype
ENSDARG00000042780 (apoba)
apolipoprotein Ba
ENSDART00000062793 (apoba-001) 30763178-30787076 protein_coding
ENSDARG00000079796 (C17H2orf43)
chromosome 2 open reading frame 43
ENSDART00000115296 (C17H2orf43-001) 30808361-30876340 protein_coding
ENSDART00000154184 (C17H2orf43-002) 30810572-30831061 protein_coding
ENSDART00000154225 (C17H2orf43-003) 30855983-30857029 processed_transcript
CIL_0007ID_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020609-ENSMUSG00000037669 CGP 10090 12:7977648-8285758
GeneTranscriptPositionBiotype
ENSMUSG00000020609 (Apob)
apolipoprotein B
ENSMUST00000037520 (Apob-004) 7977779-8016500 protein_coding
ENSMUST00000037811 (Apob-001) 7977648-8016835 protein_coding
ENSMUST00000171239 (Apob-005) 8012359-8016835 protein_coding
ENSMUST00000171271 (Apob-002) 7977648-7987818 protein_coding
ENSMUSG00000037669 (1110057K04Rik)
RIKEN cDNA 1110057K04 gene
ENSMUST00000037383 (1110057K04Rik-201) 8208107-8285758 protein_coding
ENSMUST00000169104 (1110057K04Rik-202) 8208127-8285758 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007ID_0001ENSDARG00000042780ENSDART00000062793ENSDARG00000079796ENSDART00000115296ENSDART00000154184ENSDART00000154225CIL_0007ID_0002ENSMUSG00000020609ENSMUST00000037520ENSMUST00000037811ENSMUST00000171239ENSMUST00000171271ENSMUSG00000037669ENSMUST00000037383ENSMUST00000169104
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007ID_0001ENSDARG00000042780ENSDART00000062793ENSDARG00000079796ENSDART00000115296CIL_0007ID_0002ENSMUSG00000020609ENSMUST00000037520ENSMUST00000037811ENSMUST00000171239ENSMUST00000171271ENSMUSG00000037669ENSMUST00000037383ENSMUST00000169104
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042780 ENSDART00000062793 N/A N/A N/A 0.026±0.01 N/A N/A 0.451±0.21 21.543±3.88 8.335±0.00 N/A 0.374±0.00 N/A N/A N/A
ENSDARG00000079796 ENSDART00000115296 N/A N/A N/A 2.666±0.44 N/A N/A 1.914±1.55 2.384±0.00 1.218±0.00 N/A 0.833±0.00 N/A N/A N/A
ENSDART00000154184 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000154225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020609 ENSMUST00000037520 0.008±0.00 0.020±0.00 0.008±0.00 0.001±0.00 0.056±0.05 0.279±0.06 N/A N/A 3.563±0.00 N/A 0.014±0.00 0.050±0.06 12.012±10.84 0.012±0.01
ENSMUST00000037811 0.062±0.04 N/A 0.004±0.00 N/A 0.196±0.06 0.826±0.19 0.008±0.00 4.904±0.86 66.162±42.10 0.092±0.02 0.002±0.00 0.052±0.02 61.738±53.56 0.005±0.00
ENSMUST00000171239 0.011±0.00 0.129±0.02 0.029±0.00 0.097±0.00 0.709±0.17 1.521±0.41 0.056±0.04 8.625±0.83 164.348±87.13 0.133±0.03 0.033±0.02 0.257±0.19 163.436±182.61 0.015±0.01
ENSMUST00000171271 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.167±0.11 N/A N/A
ENSMUSG00000037669 ENSMUST00000037383 8.848±4.04 1.481±0.00 6.400±0.60 3.058±0.10 9.112±5.30 2.822±0.53 2.627±0.56 4.935±1.45 3.847±1.56 2.735±1.41 1.307±0.80 3.798±2.36 3.198±1.98 1.760±0.34
ENSMUST00000169104 12.359±4.70 11.904±2.65 7.041±0.86 2.224±0.63 7.489±2.37 6.768±3.02 5.178±1.06 5.855±1.59 6.150±3.35 5.612±0.60 1.123±0.08 8.840±3.11 5.427±0.99 1.622±0.76

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