C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007IM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130943-ENSG00000075234 CGP 9606 22:46255663-46294008
GeneTranscriptPositionBiotype
ENSG00000075234 (TTC38)
tetratricopeptide repeat domain 38 		ENST00000381031 (TTC38-001) 46267964-46294008 protein_coding
ENST00000417709 (TTC38-002) 46267961-46275285 nonsense_mediated_decay
ENST00000421359 (TTC38-005) 46268008-46280242 protein_coding
ENST00000422713 (TTC38-003) 46272372-46284032 nonsense_mediated_decay
ENST00000451998 (TTC38-006) 46288510-46292933 nonsense_mediated_decay
ENST00000475467 (TTC38-004) 46268008-46268927 retained_intron
ENSG00000130943 (PKDREJ)
polycystin (PKD) family receptor for egg jelly 		ENST00000253255 (PKDREJ-001) 46255663-46263355 protein_coding
CIL_0007IM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000052496-ENSMUSG00000035944 CGP 10090 15:85814676-85858822
GeneTranscriptPositionBiotype
ENSMUSG00000052496 (Pkdrej)
polycystic kidney disease (polycystin) and REJ (sperm receptor for egg jelly homolog, sea urchin) 		ENSMUST00000064370 (Pkdrej-201) 85814676-85821733 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IM_0001ENSG00000075234ENST00000381031ENST00000417709ENST00000421359ENST00000422713ENST00000451998ENST00000475467ENSG00000130943ENST00000253255CIL_0007IM_0002ENSMUSG00000052496ENSMUST00000064370
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IM_0001ENSG00000075234ENST00000381031ENST00000417709ENST00000421359ENST00000422713ENSG00000130943ENST00000253255CIL_0007IM_0002ENSMUSG00000052496ENSMUST00000064370
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000075234 ENST00000381031 5.325±0.00 6.317±0.00 2.239±0.00 1.127±0.46 5.578±3.81 8.156±1.06 3.368±2.14 19.137±3.92 29.312±27.84 3.943±2.29 4.277±3.82 10.794±6.83 6.187±1.47 5.293±0.00
ENST00000417709 N/A N/A N/A N/A N/A N/A 1.326±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000421359 N/A N/A N/A N/A 2.985±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422713 N/A N/A N/A 0.639±0.00 2.246±0.00 2.745±0.00 N/A 9.653±0.00 1.182±0.00 N/A 1.999±0.00 N/A N/A 1.634±0.00
ENST00000451998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000130943 ENST00000253255 0.021±0.00 0.147±0.00 0.228±0.00 0.126±0.06 0.140±0.06 0.152±0.12 0.047±0.00 0.107±0.04 0.107±0.10 0.077±0.06 0.022±0.02 0.222±0.16 0.032±0.01 3.377±1.50
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000052496 ENSMUST00000064370 0.313±0.28 0.116±0.03 0.235±0.00 0.055±0.03 0.066±0.04 0.655±0.05 0.909±0.08 0.091±0.03 0.087±0.04 0.253±0.03 0.131±0.03 0.289±0.10 0.021±0.01 8.667±2.58

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