C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 38
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000075234 TTC38 9606 + 22:46267961-46294008 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000381031 TTC38-001 46267964-46294008 protein_coding
  ENST00000417709 TTC38-002 46267961-46275285 nonsense_mediated_decay
  ENST00000421359 TTC38-005 46268008-46280242 protein_coding
  ENST00000422713 TTC38-003 46272372-46284032 nonsense_mediated_decay
  ENST00000451998 TTC38-006 46288510-46292933 nonsense_mediated_decay
  ENST00000475467 TTC38-004 46268008-46268927 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000381031ENST00000417709ENST00000421359ENST00000422713
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000381031 5.325±0.00 6.317±0.00 2.239±0.00 1.127±0.46 5.578±3.81 8.156±1.06 3.368±2.14 19.137±3.92 29.312±27.84 3.943±2.29 4.277±3.82 10.794±6.83 6.187±1.47 5.293±0.00
ENST00000417709 N/A N/A N/A N/A N/A N/A 1.326±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000421359 N/A N/A N/A N/A 2.985±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422713 N/A N/A N/A 0.639±0.00 2.246±0.00 2.745±0.00 N/A 9.653±0.00 1.182±0.00 N/A 1.999±0.00 N/A N/A 1.634±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IM CIL_0007IM_0001 CGP 22:46255663-46294008
CIL_0007IN CIL_0007IN_0001 CGP 22:46267961-46330810

Gene Ontology
GO IDEvidence TypeGO Description
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042188 ttc38 tetratricopeptide repeat domain 38 protein_coding Danio_rerio
ENSMUSG00000035944 Ttc38 tetratricopeptide repeat domain 38 protein_coding Mus_musculus

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