C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tetratricopeptide repeat domain 38
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417709 TTC38-002 ENSG00000075234 9606 + 22:46267961-46275285 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENST00000417709
Transcript ID Heart
ENST00000417709 1.326±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IM CIL_0007IM_0001 CGP 22:46255663-46294008
CIL_0007IN CIL_0007IN_0001 CGP 22:46267961-46330810

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146088 Ttc38-001 protein_coding Mus_musculus 0 287
ENSMUST00000124011 Ttc38-003 nonsense_mediated_decay Mus_musculus 2e-23 113
ENSMUST00000133158 Ttc38-002 processed_transcript Mus_musculus 2e-23 113

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