C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 38
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000381031 TTC38-001 ENSG00000075234 9606 + 22:46267964-46294008 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000381031
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000381031 5.325±0.00 6.317±0.00 2.239±0.00 1.127±0.46 5.578±3.81 8.156±1.06 3.368±2.14 19.137±3.92 29.312±27.84 3.943±2.29 4.277±3.82 10.794±6.83 6.187±1.47 5.293±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IM CIL_0007IM_0001 CGP 22:46255663-46294008
CIL_0007IN CIL_0007IN_0001 CGP 22:46267961-46330810

Gene Ontology

GO IDEvidence TypeGO Description
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000146088 Ttc38-001 protein_coding Mus_musculus 0 1399
ENSMUST00000133158 Ttc38-002 processed_transcript Mus_musculus 0 848
ENSMUST00000124011 Ttc38-003 nonsense_mediated_decay Mus_musculus 0 224

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