C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007IN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000075234-ENSG00000075218 CGP 9606 22:46267961-46330810
GeneTranscriptPositionBiotype
ENSG00000075218 (GTSE1)
G-2 and S-phase expressed 1 		ENST00000454366 (GTSE1-001) 46296741-46330810 protein_coding
ENST00000466510 (GTSE1-003) 46316037-46327316 retained_intron
ENST00000479645 (GTSE1-002) 46316037-46329130 retained_intron
ENST00000491863 (GTSE1-004) 46328923-46330152 retained_intron
ENSG00000075234 (TTC38)
tetratricopeptide repeat domain 38 		ENST00000381031 (TTC38-001) 46267964-46294008 protein_coding
ENST00000417709 (TTC38-002) 46267961-46275285 nonsense_mediated_decay
ENST00000421359 (TTC38-005) 46268008-46280242 protein_coding
ENST00000422713 (TTC38-003) 46272372-46284032 nonsense_mediated_decay
ENST00000451998 (TTC38-006) 46288510-46292933 nonsense_mediated_decay
ENST00000475467 (TTC38-004) 46268008-46268927 retained_intron
ENSG00000277232 (GTSE1-AS1)
GTSE1 antisense RNA 1 (head to head) 		ENST00000617229 (GTSE1-AS1-201) 46295695-46296000 lincRNA
ENST00000623117 (GTSE1-AS1-001) 46295143-46296660 lincRNA
CIL_0007IN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035944-ENSMUSG00000022385 CGP 10090 15:85832306-85876572
GeneTranscriptPositionBiotype
ENSMUSG00000022385 (Gtse1)
G two S phase expressed protein 1 		ENSMUST00000170629 (Gtse1-201) 85859707-85876572 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IN_0001ENSG00000075218ENST00000454366ENST00000466510ENST00000479645ENST00000491863ENSG00000075234ENST00000381031ENST00000417709ENST00000421359ENST00000422713ENST00000451998ENST00000475467ENSG00000277232ENST00000617229ENST00000623117CIL_0007IN_0002ENSMUSG00000022385ENSMUST00000170629
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IN_0001ENSG00000075218ENST00000454366ENST00000466510ENST00000479645ENST00000491863ENSG00000075234ENST00000381031ENST00000417709ENST00000421359ENST00000422713ENSG00000277232ENST00000617229ENST00000623117CIL_0007IN_0002ENSMUSG00000022385ENSMUST00000170629
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000075218 ENST00000454366 0.186±0.00 N/A 0.049±0.00 0.142±0.00 0.318±0.00 0.084±0.00 0.054±0.03 0.061±0.05 0.022±0.00 0.102±0.08 N/A 2.309±1.81 1.381±0.20 3.791±0.16
ENST00000466510 0.190±0.00 0.365±0.00 0.229±0.00 0.179±0.00 N/A 0.105±0.00 N/A 0.049±0.00 0.020±0.00 N/A N/A N/A N/A N/A
ENST00000479645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.229±0.00 7.043±0.00 18.221±0.00
ENST00000491863 N/A N/A N/A N/A 0.790±0.00 N/A N/A 0.236±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000075234 ENST00000381031 5.325±0.00 6.317±0.00 2.239±0.00 1.127±0.46 5.578±3.81 8.156±1.06 3.368±2.14 19.137±3.92 29.312±27.84 3.943±2.29 4.277±3.82 10.794±6.83 6.187±1.47 5.293±0.00
ENST00000417709 N/A N/A N/A N/A N/A N/A 1.326±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000421359 N/A N/A N/A N/A 2.985±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422713 N/A N/A N/A 0.639±0.00 2.246±0.00 2.745±0.00 N/A 9.653±0.00 1.182±0.00 N/A 1.999±0.00 N/A N/A 1.634±0.00
ENST00000451998 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000277232 ENST00000617229 N/A N/A N/A 0.397±0.00 N/A 0.506±0.15 N/A N/A N/A N/A 0.182±0.00 N/A N/A N/A
ENST00000623117 0.158±0.00 0.178±0.00 0.443±0.00 0.262±0.23 0.401±0.13 0.189±0.05 0.054±0.03 0.328±0.00 0.074±0.02 0.227±0.18 0.451±0.41 0.146±0.09 0.296±0.07 0.833±0.21
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022385 ENSMUST00000170629 0.575±0.47 1.056±0.25 3.202±0.22 3.712±2.86 0.868±0.49 3.299±1.37 0.221±0.04 0.322±0.10 8.597±9.13 0.541±0.05 0.075±0.05 3.968±1.92 7.363±5.45 3.046±1.73

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