C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007LC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
PRDM8 UCNEbase 9606 4:78987504-79906161
GeneTranscriptPositionBiotype
ENSG00000156269 (NAA11)
N(alpha)-acetyltransferase 11, NatA catalytic subunit
ENST00000286794 (NAA11-001) 79316653-79326050 protein_coding
ENST00000511542 (NAA11-002) 79225694-79325523 nonsense_mediated_decay
ENST00000513733 (NAA11-003) 79225980-79325468 processed_transcript
ENSG00000163297 (ANTXR2)
anthrax toxin receptor 2
ENST00000307333 (ANTXR2-001) 79977579-80072563 protein_coding
ENST00000346652 (ANTXR2-002) 79977537-80072700 protein_coding
ENST00000403729 (ANTXR2-004) 79901149-80073086 protein_coding
ENST00000404191 (ANTXR2-003) 79907353-80073472 protein_coding
ENST00000449651 (ANTXR2-005) 79905571-80071620 nonsense_mediated_decay
ENST00000482406 (ANTXR2-007) 79906762-79964890 processed_transcript
ENST00000491345 (ANTXR2-006) 79907170-79965097 processed_transcript
ENST00000506286 (ANTXR2-008) 80069436-80125454 processed_transcript
ENST00000514959 (ANTXR2-009) 80054281-80079600 processed_transcript
ENSG00000196475 (GK2)
glycerol kinase 2
ENST00000358842 (GK2-001) 79406352-79408293 protein_coding
ENSG00000248408 (RP11-452C8.1)
ENST00000506460 (RP11-452C8.1-001) 79663761-79696837 lincRNA
ENSG00000249307 (LINC01088)
long intergenic non-protein coding RNA 1088
ENST00000437737 (LINC01088-010) 79211681-79245532 antisense
ENST00000505149 (LINC01088-006) 79305123-79308798 antisense
ENST00000507476 (LINC01088-005) 79195837-79308755 antisense
ENST00000507761 (LINC01088-008) 79195836-79227956 antisense
ENST00000509088 (LINC01088-001) 78971748-79308544 antisense
ENST00000510667 (LINC01088-004) 78971748-79308472 antisense
ENST00000511241 (LINC01088-007) 79258781-79308654 antisense
ENST00000511895 (LINC01088-009) 79211685-79227886 antisense
ENST00000512130 (LINC01088-003) 79197541-79308655 antisense
ENST00000513153 (LINC01088-002) 79085239-79308653 antisense
ENST00000515597 (LINC01088-011) 79195834-79299565 antisense
ENSG00000249646 (OR7E94P)
olfactory receptor, family 7, subfamily E, member 94 pseudogene
ENST00000502331 (OR7E94P-001) 79587757-79588130 transcribed_unprocessed_pseudogene
ENST00000601375 (OR7E94P-002) 79587302-79588091 processed_transcript
ENSG00000250334 (LINC00989)
long intergenic non-protein coding RNA 989
ENST00000508174 (LINC00989-001) 79492416-79576460 lincRNA
ENST00000515544 (LINC00989-002) 79492593-79576458 lincRNA
ENSG00000251321 (PCAT4)
prostate cancer associated transcript 4 (non-protein coding)
ENST00000504263 (PCAT4-001) 79827471-79863247 lincRNA
ENST00000514836 (PCAT4-002) 79827535-79877770 lincRNA
ENSG00000251399 (RP11-234K19.1)
ENST00000513155 (RP11-234K19.1-001) 79596542-79597173 lincRNA
CIL_0007LC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
PRDM8 UCNEbase 10090 5:97148425-97885285
GeneTranscriptPositionBiotype
ENSMUSG00000029338 (Antxr2)
anthrax toxin receptor 2
ENSMUST00000031281 (Antxr2-201) 97882783-98030733 protein_coding
ENSMUSG00000046000 (Naa11)
N(alpha)-acetyltransferase 11, NatA catalytic subunit
ENSMUST00000060265 (Naa11-201) 97382224-97392330 protein_coding
ENSMUSG00000050553 (Gk2)
glycerol kinase 2
ENSMUST00000059657 (Gk2-201) 97455161-97457008 protein_coding
ENSMUSG00000067161 (Gm5560)
predicted pseudogene 5560
ENSMUST00000086918 (Gm5560-001) 97264828-97265719 processed_pseudogene
ENSMUSG00000097516 (4930467D21Rik)
RIKEN cDNA 4930467D21 gene
ENSMUST00000180634 (4930467D21Rik-201) 97392447-97588125 lincRNA
ENSMUST00000181724 (4930467D21Rik-202) 97392440-97586878 lincRNA
CIL_0007LC_0003 (Click to Hide/Show)
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Warning (2): Invalid argument supplied for foreach() [APP/View/Region/show.ctp, line 46]
Source ID Type Tax ID Position
PRDM8 UCNEbase 7955 5:40780537-40991359
GeneTranscriptPositionBiotype

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007LC_0001ENSG00000156269ENST00000286794ENST00000511542ENST00000513733ENSG00000163297ENST00000307333ENST00000346652ENST00000403729ENST00000404191ENST00000449651ENST00000482406ENST00000491345ENST00000506286ENST00000514959ENSG00000196475ENST00000358842ENSG00000248408ENST00000506460ENSG00000249307ENST00000437737ENST00000505149ENST00000507476ENST00000507761ENST00000509088ENST00000510667ENST00000511241ENST00000511895ENST00000512130ENST00000513153ENST00000515597ENSG00000249646ENST00000502331ENST00000601375ENSG00000250334ENST00000508174ENST00000515544ENSG00000251321ENST00000504263ENST00000514836ENSG00000251399ENST00000513155CIL_0007LC_0002ENSMUSG00000029338ENSMUST00000031281ENSMUSG00000046000ENSMUST00000060265ENSMUSG00000050553ENSMUST00000059657ENSMUSG00000067161ENSMUST00000086918ENSMUSG00000097516ENSMUST00000180634ENSMUST00000181724
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007LC_0001ENSG00000156269ENST00000286794ENST00000511542ENST00000513733ENSG00000163297ENST00000307333ENST00000403729ENST00000404191ENST00000449651ENST00000482406ENSG00000196475ENST00000358842ENSG00000248408ENST00000506460ENSG00000249307ENST00000437737ENST00000505149ENST00000507476ENST00000507761ENST00000509088ENST00000510667ENST00000511895ENST00000512130ENST00000513153ENST00000515597ENSG00000249646ENST00000502331ENST00000601375ENSG00000250334ENST00000508174ENST00000515544ENSG00000251321ENST00000504263ENSG00000251399ENST00000513155CIL_0007LC_0002ENSMUSG00000029338ENSMUST00000031281ENSMUSG00000046000ENSMUST00000060265ENSMUSG00000050553ENSMUST00000059657ENSMUSG00000067161ENSMUST00000086918ENSMUSG00000097516ENSMUST00000180634ENSMUST00000181724
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156269 ENST00000286794 N/A N/A N/A N/A N/A 0.011±0.00 0.023±0.00 N/A N/A N/A N/A N/A 3.599±0.58 4.303±0.56
ENST00000511542 N/A N/A N/A 0.119±0.00 0.158±0.00 N/A 0.082±0.00 N/A N/A 0.286±0.00 N/A N/A 0.769±0.00 N/A
ENST00000513733 N/A N/A N/A N/A N/A 0.152±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163297 ENST00000307333 N/A N/A N/A N/A N/A N/A 2.049±0.00 N/A N/A N/A N/A 4.506±0.00 N/A N/A
ENST00000346652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000403729 8.671±0.00 2.261±0.00 0.544±0.00 0.156±0.03 3.030±0.27 7.749±4.24 1.040±0.20 1.658±0.23 5.948±3.24 1.787±0.99 0.501±0.36 2.085±0.78 6.393±0.23 1.807±1.17
ENST00000404191 N/A N/A 1.177±0.00 N/A 5.415±0.00 N/A N/A N/A N/A 7.813±0.00 N/A N/A N/A N/A
ENST00000449651 49.049±0.00 12.437±0.00 1.772±0.00 0.889±0.49 14.216±7.22 45.119±37.36 1.526±0.00 5.029±1.88 16.532±6.73 4.958±0.00 2.855±2.10 8.679±4.68 24.307±5.03 13.070±10.85
ENST00000482406 45.193±0.00 8.907±0.00 3.829±0.00 1.218±0.01 21.367±1.85 42.666±24.89 4.187±0.00 7.275±2.58 28.337±19.07 6.729±0.00 3.992±2.48 14.175±0.81 36.816±23.60 12.355±5.82
ENST00000491345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506286 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000196475 ENST00000358842 0.050±0.00 0.081±0.00 N/A 0.013±0.00 N/A N/A N/A 0.168±0.00 N/A N/A N/A N/A N/A 56.661±21.26
ENSG00000248408 ENST00000506460 0.784±0.00 2.419±0.00 N/A 1.834±0.00 1.283±0.00 1.007±0.00 0.386±0.00 1.412±0.00 1.109±0.00 0.961±0.00 0.250±0.00 0.413±0.26 0.845±0.63 1.518±0.48
ENSG00000249307 ENST00000437737 0.956±0.00 1.768±0.00 N/A N/A 0.575±0.41 N/A N/A 0.928±0.00 0.208±0.00 1.028±0.00 N/A 0.647±0.00 N/A 1.678±0.00
ENST00000505149 N/A N/A N/A 1.431±1.08 N/A 1.422±0.00 N/A N/A N/A 0.237±0.00 N/A N/A 0.383±0.00 0.690±0.00
ENST00000507476 N/A N/A N/A N/A 0.277±0.00 N/A N/A N/A N/A N/A N/A N/A 0.267±0.00 N/A
ENST00000507761 0.282±0.00 N/A 0.050±0.00 N/A 0.372±0.04 N/A 0.271±0.16 0.028±0.00 N/A 0.281±0.00 N/A N/A N/A 1.879±0.00
ENST00000509088 0.388±0.00 0.756±0.00 N/A 1.543±1.06 N/A 1.279±0.00 0.280±0.00 1.434±0.00 N/A 0.325±0.00 N/A 0.333±0.12 0.678±0.24 1.925±0.14
ENST00000510667 N/A N/A N/A N/A 0.533±0.00 1.742±0.00 0.421±0.00 1.402±0.00 0.045±0.00 0.269±0.00 1.451±0.00 0.642±0.15 0.351±0.12 N/A
ENST00000511241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511895 N/A 0.913±0.00 N/A 1.074±0.00 N/A 0.256±0.00 N/A 0.342±0.21 0.064±0.00 0.184±0.00 N/A N/A N/A 0.566±0.00
ENST00000512130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.580±0.00 N/A 0.189±0.00 N/A
ENST00000513153 N/A N/A N/A 1.775±0.00 0.131±0.00 1.411±0.00 0.395±0.00 N/A N/A N/A N/A 0.866±0.67 0.121±0.00 1.487±0.59
ENST00000515597 N/A N/A N/A 0.450±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249646 ENST00000502331 N/A N/A N/A N/A N/A 0.183±0.00 N/A N/A N/A N/A N/A N/A 0.047±0.00 0.239±0.00
ENST00000601375 0.201±0.00 0.961±0.00 0.145±0.00 0.312±0.00 0.158±0.00 0.235±0.09 0.195±0.00 0.362±0.00 0.069±0.00 0.026±0.00 0.462±0.00 0.503±0.61 0.144±0.02 0.406±0.27
ENSG00000250334 ENST00000508174 0.233±0.00 0.339±0.00 0.090±0.00 N/A N/A 0.039±0.00 0.165±0.10 N/A N/A 0.160±0.00 N/A 0.088±0.03 0.006±0.00 0.128±0.03
ENST00000515544 0.400±0.00 0.491±0.00 0.091±0.00 0.029±0.00 0.389±0.12 0.150±0.11 0.068±0.00 0.152±0.00 0.133±0.00 0.046±0.00 0.443±0.35 0.060±0.05 0.072±0.05 0.213±0.11
ENSG00000251321 ENST00000504263 N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A N/A 0.012±0.00 N/A N/A N/A 0.009±0.00
ENST00000514836 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251399 ENST00000513155 0.302±0.00 0.232±0.00 N/A N/A N/A 0.179±0.00 0.495±0.00 0.161±0.00 N/A N/A N/A 0.096±0.00 N/A 0.273±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029338 ENSMUST00000031281 8.654±2.68 8.794±2.66 2.726±0.59 0.524±0.26 6.001±1.23 5.362±0.31 6.957±3.10 1.205±0.11 2.227±1.55 5.292±3.22 1.265±0.16 4.600±1.88 1.271±0.37 0.846±0.57
ENSMUSG00000046000 ENSMUST00000060265 0.012±0.00 N/A N/A 0.008±0.00 N/A 0.027±0.00 0.010±0.00 0.019±0.01 0.015±0.00 0.014±0.00 0.014±0.00 0.425±0.25 0.196±0.11 5.402±2.06
ENSMUSG00000050553 ENSMUST00000059657 N/A N/A N/A 0.009±0.00 N/A 0.137±0.09 0.048±0.02 0.064±0.02 N/A N/A N/A N/A 0.003±0.00 152.008±22.02
ENSMUSG00000067161 ENSMUST00000086918 1.349±0.59 0.238±0.12 0.035±0.01 0.093±0.08 0.983±0.24 2.058±1.12 0.657±0.30 1.751±0.98 0.143±0.14 0.652±0.04 N/A 1.551±0.94 0.017±0.00 0.079±0.04
ENSMUSG00000097516 ENSMUST00000180634 N/A N/A N/A 0.016±0.01 N/A N/A N/A N/A N/A N/A N/A N/A 0.004±0.00 0.309±0.09
ENSMUST00000181724 N/A N/A N/A N/A N/A N/A N/A N/A 0.004±0.00 N/A N/A 0.027±0.00 0.014±0.00 0.821±0.34

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