C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycerol kinase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000059657 Gk2-201 ENSMUSG00000050553 10090 - 5:97455161-97457008 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyPlacentaTestisENSMUST00000059657
Transcript ID Brain Colon Heart Kidney Placenta Testis
ENSMUST00000059657 0.009±0.00 0.137±0.09 0.048±0.02 0.064±0.02 0.003±0.00 152.008±22.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LC CIL_0007LC_0002 UCNEbase 5:97148425-97885285
CIL_000920 CIL_000920_0002 VISTA 5:97242961-97843765
CIL_0007XK CIL_0007XK_0002 VISTA 5:97246822-97847439
CIL_00069S CIL_00069S_0002 CGP 5:97382224-97457008
CIL_00069T CIL_00069T_0002 CGP 5:97455161-98030733

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004370 IEA glycerol kinase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0005741 IEA mitochondrial outer membrane
GO:0006072 IEA glycerol-3-phosphate metabolic process
GO:0016310 IEA phosphorylation
GO:0019563 IEA glycerol catabolic process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000328462 RP1-232L22__B.1-001 processed_pseudogene Homo_sapiens 0 1399
ENST00000358842 GK2-001 protein_coding Homo_sapiens 0 1581
ENST00000378938 GK-006 protein_coding Homo_sapiens 0 224
ENST00000378943 GK-004 protein_coding Homo_sapiens 0 1465
ENST00000378945 GK-009 protein_coding Homo_sapiens 0 1428
ENST00000378946 GK-003 protein_coding Homo_sapiens 0 1362
ENST00000427190 GK-201 protein_coding Homo_sapiens 0 1399
ENST00000481024 GK-007 nonsense_mediated_decay Homo_sapiens 0 1223
ENST00000505354 RP11-668G10.2-001 processed_pseudogene Homo_sapiens 0 1435
ENST00000505994 GK3P-001 unprocessed_pseudogene Homo_sapiens 0 1393

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