C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007QY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs680 VISTA 9606 4:84024438-84625402
GeneTranscriptPositionBiotype
ENSG00000163623 (NKX6-1)
NK6 homeobox 1 		ENST00000295886 (NKX6-1-001) 84491987-84498450 protein_coding
ENST00000515820 (NKX6-1-002) 84491987-84496950 protein_coding
ENSG00000163624 (CDS1)
CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1 		ENST00000295887 (CDS1-001) 84582979-84651338 protein_coding
ENST00000511298 (CDS1-002) 84583269-84619511 nonsense_mediated_decay
ENSG00000214980 (RP11-274J2.1)
 ENST00000510707 (RP11-274J2.1-001) 84244003-84245488 processed_pseudogene
ENSG00000248749 (RP11-42A4.1)
 ENST00000504840 (RP11-42A4.1-001) 84371393-84380189 lincRNA
ENSG00000250546 (RP11-8L2.1)
 ENST00000508406 (RP11-8L2.1-001) 83968082-84293412 lincRNA
ENST00000510016 (RP11-8L2.1-003) 84147733-84149288 antisense
ENST00000513489 (RP11-8L2.1-002) 83796436-84284327 lincRNA
ENSG00000258013 (RPL3P13)
ribosomal protein L3 pseudogene 13 		ENST00000550415 (RPL3P13-001) 84544304-84544519 processed_pseudogene
CIL_0007QY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs680 VISTA 10090 5:101196956-101797906
GeneTranscriptPositionBiotype
ENSMUSG00000029330 (Cds1)
CDP-diacylglycerol synthase 1 		ENSMUST00000031273 (Cds1-001) 101765130-101823858 protein_coding
ENSMUST00000132213 (Cds1-002) 101806548-101821447 retained_intron
ENSMUSG00000035187 (Nkx6-1)
NK6 homeobox 1 		ENSMUST00000044125 (Nkx6-1-001) 101659177-101664996 protein_coding
ENSMUSG00000092503 (Gm20484)
predicted gene 20484 		ENSMUST00000173738 (Gm20484-001) 101599314-101602375 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007QY_0001ENSG00000163623ENST00000295886ENST00000515820ENSG00000163624ENST00000295887ENST00000511298ENSG00000214980ENST00000510707ENSG00000248749ENST00000504840ENSG00000250546ENST00000508406ENST00000510016ENST00000513489ENSG00000258013ENST00000550415CIL_0007QY_0002ENSMUSG00000029330ENSMUST00000031273ENSMUST00000132213ENSMUSG00000035187ENSMUST00000044125ENSMUSG00000092503ENSMUST00000173738
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007QY_0001ENSG00000163623ENST00000295886ENST00000515820ENSG00000163624ENST00000295887ENSG00000214980ENST00000510707ENSG00000248749ENST00000504840ENSG00000250546ENST00000508406ENST00000513489ENSG00000258013ENST00000550415CIL_0007QY_0002ENSMUSG00000029330ENSMUST00000031273ENSMUST00000132213ENSMUSG00000035187ENSMUST00000044125ENSMUSG00000092503ENSMUST00000173738
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163623 ENST00000295886 0.008±0.00 0.024±0.00 0.081±0.00 0.289±0.00 0.023±0.00 0.007±0.00 0.008±0.00 0.008±0.00 N/A 0.102±0.00 0.006±0.00 0.396±0.39 0.125±0.11 0.614±0.18
ENST00000515820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.001±0.00 0.171±0.00 0.019±0.00 0.148±0.03
ENSG00000163624 ENST00000295887 0.080±0.00 0.094±0.00 0.864±0.00 4.124±1.53 0.482±0.18 0.559±0.35 0.093±0.02 4.012±0.00 0.269±0.06 1.844±0.89 N/A 2.402±1.18 2.387±1.24 3.214±0.03
ENST00000511298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000214980 ENST00000510707 N/A N/A N/A N/A N/A 0.236±0.00 N/A N/A N/A N/A N/A N/A N/A 0.015±0.00
ENSG00000248749 ENST00000504840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.03
ENSG00000250546 ENST00000508406 N/A N/A N/A 0.003±0.00 N/A 0.042±0.00 0.006±0.00 N/A N/A 0.005±0.00 N/A N/A N/A 0.015±0.01
ENST00000510016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.094±0.00
ENSG00000258013 ENST00000550415 0.083±0.00 0.177±0.00 N/A N/A 0.432±0.00 1.631±0.00 N/A N/A N/A N/A 0.075±0.00 N/A N/A 0.182±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029330 ENSMUST00000031273 1.270±0.23 3.565±0.58 40.171±7.22 5.853±5.15 2.137±0.39 49.340±6.30 0.348±0.07 14.416±1.38 0.132±0.08 9.599±0.55 0.172±0.07 5.527±2.15 9.437±3.14 40.477±18.66
ENSMUST00000132213 3.813±1.69 N/A N/A N/A 3.713±0.00 N/A 0.965±0.00 N/A 0.208±0.01 N/A 0.530±0.00 N/A 18.910±0.00 50.561±0.00
ENSMUSG00000035187 ENSMUST00000044125 0.025±0.00 0.013±0.00 0.088±0.02 0.535±0.42 0.063±0.03 0.011±0.00 0.051±0.02 0.056±0.03 0.019±0.01 0.173±0.12 0.057±0.00 0.028±0.01 0.197±0.26 0.236±0.11
ENSMUSG00000092503 ENSMUST00000173738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.137±1.98

Loading