C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0007UO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs236 VISTA 9606 11:15994661-16596016
GeneTranscriptPositionBiotype
ENSG00000213785 (RP11-449L13.2)
ENST00000525311 (RP11-449L13.2-001) 16484084-16484671 processed_pseudogene
ENSG00000241943 (RN7SL188P)
RNA, 7SL, cytoplasmic 188, pseudogene
ENST00000469842 (RN7SL188P-201) 16576851-16577135 misc_RNA
ENSG00000254878 (CTD-3096P4.1)
ENST00000531763 (CTD-3096P4.1-001) 16023190-16031515 antisense
CIL_0007UO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs236 VISTA 10090 7:115449542-116050857
GeneTranscriptPositionBiotype
ENSMUSG00000030664 (Sox6os)
SRY (sex determining region Y)-box 6, opposite strand
ENSMUST00000032900 (Sox6os-001) 116031979-116032550 antisense
ENSMUSG00000051910 (Sox6)
SRY (sex determining region Y)-box 6
ENSMUST00000072804 (Sox6-201) 115471344-115995086 protein_coding
ENSMUST00000106612 (Sox6-202) 115471344-116031047 protein_coding
ENSMUST00000166207 (Sox6-203) 115476658-115846105 protein_coding
ENSMUST00000166877 (Sox6-204) 115471344-116038744 protein_coding
ENSMUST00000169129 (Sox6-205) 115474475-115824707 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007UO_0001ENSG00000213785ENST00000525311ENSG00000241943ENST00000469842ENSG00000254878ENST00000531763CIL_0007UO_0002ENSMUSG00000030664ENSMUST00000032900ENSMUSG00000051910ENSMUST00000072804ENSMUST00000106612ENSMUST00000166207ENSMUST00000166877ENSMUST00000169129
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007UO_0001ENSG00000213785ENST00000525311ENSG00000241943ENST00000469842ENSG00000254878ENST00000531763CIL_0007UO_0002ENSMUSG00000030664ENSMUST00000032900ENSMUSG00000051910ENSMUST00000072804ENSMUST00000106612ENSMUST00000166207ENSMUST00000166877ENSMUST00000169129
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000213785 ENST00000525311 N/A N/A 0.103±0.00 N/A N/A 0.312±0.00 0.056±0.00 0.031±0.00 N/A N/A 0.026±0.00 N/A N/A 0.167±0.00
ENSG00000241943 ENST00000469842 N/A N/A 1.071±0.00 N/A N/A 0.507±0.00 N/A N/A N/A N/A N/A N/A N/A 0.137±0.00
ENSG00000254878 ENST00000531763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.586±0.00 0.423±0.17
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030664 ENSMUST00000032900 12.533±6.69 1.714±0.71 1.232±0.25 0.116±0.05 10.032±1.38 0.388±0.28 1.230±0.58 2.473±0.58 1.677±1.39 0.933±0.58 4.266±1.05 1.053±0.33 0.232±0.00 0.116±0.00
ENSMUSG00000051910 ENSMUST00000072804 N/A N/A N/A 0.865±0.00 N/A 0.238±0.08 N/A N/A 1.960±0.00 0.143±0.00 N/A 0.319±0.13 0.168±0.00 N/A
ENSMUST00000106612 N/A N/A N/A 0.557±0.00 0.188±0.00 N/A N/A N/A 0.735±0.32 0.077±0.00 N/A 0.355±0.00 N/A N/A
ENSMUST00000166207 N/A N/A N/A 2.003±0.00 N/A N/A N/A N/A N/A N/A N/A 0.368±0.25 0.240±0.00 16.894±16.22
ENSMUST00000166877 0.220±0.00 0.139±0.03 N/A 4.308±0.00 N/A 0.208±0.00 N/A N/A 5.011±0.00 0.103±0.00 N/A 0.348±0.03 0.186±0.13 1.958±0.41
ENSMUST00000169129 N/A 0.291±0.03 N/A N/A N/A N/A N/A N/A 0.338±0.00 N/A N/A 0.123±0.00 0.073±0.00 N/A

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