Transcript ID | Brain | Ovary | Placenta | Testis |
---|---|---|---|---|
ENSMUST00000166207 | 2.003±0.00 | 0.368±0.25 | 0.240±0.00 | 16.894±16.22 |
Transcript Info |
||||||
Description: | SRY (sex determining region Y)-box 6 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000166207 | Sox6-203 | ENSMUSG00000051910 | 10090 | - | 7:115476658-115846105 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0003ZR | CIL_0003ZR_0002 | CGP | 7:114743694-116038744 |
CIL_0007MN | CIL_0007MN_0003 | UCNEbase | 7:114963422-116027485 |
CIL_0007RU | CIL_0007RU_0002 | VISTA | 7:115295838-115899194 |
CIL_0008U3 | CIL_0008U3_0002 | VISTA | 7:115344905-115946551 |
CIL_0008HV | CIL_0008HV_0002 | VISTA | 7:115445167-116046401 |
CIL_0007UO | CIL_0007UO_0002 | VISTA | 7:115449542-116050857 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0000122 | IDA | negative regulation of transcription from RNA polymerase II promoter |
GO:0000902 | IMP | cell morphogenesis |
GO:0001701 | IMP | in utero embryonic development |
GO:0003677 | IDA | DNA binding |
GO:0003700 | IDA | sequence-specific DNA binding transcription factor activity |
GO:0005515 | IPI | protein binding |
GO:0005634 | IC | nucleus |
GO:0005667 | IC | transcription factor complex |
GO:0006351 | IEA | transcription, DNA-templated |
GO:0006355 | IDA | regulation of transcription, DNA-templated |
GO:0009791 | IMP | post-embryonic development |
GO:0010468 | IMP | regulation of gene expression |
GO:0016458 | IMP | gene silencing |
GO:0021778 | IMP | oligodendrocyte cell fate specification |
GO:0030097 | IMP | hemopoiesis |
GO:0030218 | IMP | erythrocyte differentiation |
GO:0032332 | IDA | positive regulation of chondrocyte differentiation |
GO:0042692 | IDA | muscle cell differentiation |
GO:0043565 | IDA | sequence-specific DNA binding |
GO:0044212 | IDA | transcription regulatory region DNA binding |
GO:0045165 | IGI | cell fate commitment |
GO:0045892 | IDA | negative regulation of transcription, DNA-templated |
GO:0045893 | IDA | positive regulation of transcription, DNA-templated |
GO:0045944 | IGI | positive regulation of transcription from RNA polymerase II promoter |
GO:0046982 | IPI | protein heterodimerization activity |
GO:0048709 | IMP | oligodendrocyte differentiation |
GO:0048821 | IMP | erythrocyte development |
GO:0051216 | IGI | cartilage development |
GO:0055007 | IDA | cardiac muscle cell differentiation |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSDART00000100998 | sox6-201 | protein_coding | Danio_rerio | 0 | 662 |
ENSDART00000150068 | sox6-001 | protein_coding | Danio_rerio | 0 | 662 |
ENSDART00000149843 | sox6-003 | retained_intron | Danio_rerio | 0 | 448 |
ENSDART00000006737 | sox5-201 | protein_coding | Danio_rerio | 0 | 283 |
ENSDART00000134595 | sox5-001 | protein_coding | Danio_rerio | 0 | 283 |
ENST00000316399 | SOX6-001 | protein_coding | Homo_sapiens | 0 | 2617 |
ENST00000396356 | SOX6-201 | protein_coding | Homo_sapiens | 0 | 2614 |
ENST00000524650 | SOX6-013 | processed_transcript | Homo_sapiens | 0 | 494 |
ENST00000526673 | SOX6-010 | protein_coding | Homo_sapiens | 0 | 706 |
ENST00000527619 | SOX6-003 | protein_coding | Homo_sapiens | 0 | 1539 |
ENST00000527840 | SOX6-007 | processed_transcript | Homo_sapiens | 0 | 699 |
ENST00000528252 | SOX6-002 | protein_coding | Homo_sapiens | 0 | 1543 |
ENST00000528429 | SOX6-012 | protein_coding | Homo_sapiens | 0 | 3742 |
ENST00000529469 | SOX6-008 | protein_coding | Homo_sapiens | 0 | 392 |
ENST00000530378 | SOX6-011 | nonsense_mediated_decay | Homo_sapiens | 0 | 697 |
ENST00000531297 | SOX6-014 | processed_transcript | Homo_sapiens | 0 | 405 |
ENST00000533411 | SOX6-009 | protein_coding | Homo_sapiens | 0 | 758 |
ENST00000533658 | SOX6-006 | processed_transcript | Homo_sapiens | 0 | 701 |
ENST00000533870 | SOX6-005 | retained_intron | Homo_sapiens | 0 | 702 |