C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007XK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1240 VISTA 9606 4:79209430-79810070
GeneTranscriptPositionBiotype
ENSG00000156269 (NAA11)
N(alpha)-acetyltransferase 11, NatA catalytic subunit 		ENST00000286794 (NAA11-001) 79316653-79326050 protein_coding
ENST00000511542 (NAA11-002) 79225694-79325523 nonsense_mediated_decay
ENST00000513733 (NAA11-003) 79225980-79325468 processed_transcript
ENSG00000196475 (GK2)
glycerol kinase 2 		ENST00000358842 (GK2-001) 79406352-79408293 protein_coding
ENSG00000248408 (RP11-452C8.1)
 ENST00000506460 (RP11-452C8.1-001) 79663761-79696837 lincRNA
ENSG00000249307 (LINC01088)
long intergenic non-protein coding RNA 1088 		ENST00000437737 (LINC01088-010) 79211681-79245532 antisense
ENST00000505149 (LINC01088-006) 79305123-79308798 antisense
ENST00000507476 (LINC01088-005) 79195837-79308755 antisense
ENST00000507761 (LINC01088-008) 79195836-79227956 antisense
ENST00000509088 (LINC01088-001) 78971748-79308544 antisense
ENST00000510667 (LINC01088-004) 78971748-79308472 antisense
ENST00000511241 (LINC01088-007) 79258781-79308654 antisense
ENST00000511895 (LINC01088-009) 79211685-79227886 antisense
ENST00000512130 (LINC01088-003) 79197541-79308655 antisense
ENST00000513153 (LINC01088-002) 79085239-79308653 antisense
ENST00000515597 (LINC01088-011) 79195834-79299565 antisense
ENSG00000249646 (OR7E94P)
olfactory receptor, family 7, subfamily E, member 94 pseudogene 		ENST00000502331 (OR7E94P-001) 79587757-79588130 transcribed_unprocessed_pseudogene
ENST00000601375 (OR7E94P-002) 79587302-79588091 processed_transcript
ENSG00000250334 (LINC00989)
long intergenic non-protein coding RNA 989 		ENST00000508174 (LINC00989-001) 79492416-79576460 lincRNA
ENST00000515544 (LINC00989-002) 79492593-79576458 lincRNA
ENSG00000251399 (RP11-234K19.1)
 ENST00000513155 (RP11-234K19.1-001) 79596542-79597173 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0007XK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1240 VISTA 10090 5:97246822-97847439
GeneTranscriptPositionBiotype
ENSMUSG00000046000 (Naa11)
N(alpha)-acetyltransferase 11, NatA catalytic subunit 		ENSMUST00000060265 (Naa11-201) 97382224-97392330 protein_coding
ENSMUSG00000050553 (Gk2)
glycerol kinase 2 		ENSMUST00000059657 (Gk2-201) 97455161-97457008 protein_coding
ENSMUSG00000067161 (Gm5560)
predicted pseudogene 5560 		ENSMUST00000086918 (Gm5560-001) 97264828-97265719 processed_pseudogene
ENSMUSG00000097516 (4930467D21Rik)
RIKEN cDNA 4930467D21 gene 		ENSMUST00000180634 (4930467D21Rik-201) 97392447-97588125 lincRNA
ENSMUST00000181724 (4930467D21Rik-202) 97392440-97586878 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007XK_0001ENSG00000156269ENST00000286794ENST00000511542ENST00000513733ENSG00000196475ENST00000358842ENSG00000248408ENST00000506460ENSG00000249307ENST00000437737ENST00000505149ENST00000507476ENST00000507761ENST00000509088ENST00000510667ENST00000511241ENST00000511895ENST00000512130ENST00000513153ENST00000515597ENSG00000249646ENST00000502331ENST00000601375ENSG00000250334ENST00000508174ENST00000515544ENSG00000251399ENST00000513155CIL_0007XK_0002ENSMUSG00000046000ENSMUST00000060265ENSMUSG00000050553ENSMUST00000059657ENSMUSG00000067161ENSMUST00000086918ENSMUSG00000097516ENSMUST00000180634ENSMUST00000181724
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007XK_0001ENSG00000156269ENST00000286794ENST00000511542ENST00000513733ENSG00000196475ENST00000358842ENSG00000248408ENST00000506460ENSG00000249307ENST00000437737ENST00000505149ENST00000507476ENST00000507761ENST00000509088ENST00000510667ENST00000511895ENST00000512130ENST00000513153ENST00000515597ENSG00000249646ENST00000502331ENST00000601375ENSG00000250334ENST00000508174ENST00000515544ENSG00000251399ENST00000513155CIL_0007XK_0002ENSMUSG00000046000ENSMUST00000060265ENSMUSG00000050553ENSMUST00000059657ENSMUSG00000067161ENSMUST00000086918ENSMUSG00000097516ENSMUST00000180634ENSMUST00000181724
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156269 ENST00000286794 N/A N/A N/A N/A N/A 0.011±0.00 0.023±0.00 N/A N/A N/A N/A N/A 3.599±0.58 4.303±0.56
ENST00000511542 N/A N/A N/A 0.119±0.00 0.158±0.00 N/A 0.082±0.00 N/A N/A 0.286±0.00 N/A N/A 0.769±0.00 N/A
ENST00000513733 N/A N/A N/A N/A N/A 0.152±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000196475 ENST00000358842 0.050±0.00 0.081±0.00 N/A 0.013±0.00 N/A N/A N/A 0.168±0.00 N/A N/A N/A N/A N/A 56.661±21.26
ENSG00000248408 ENST00000506460 0.784±0.00 2.419±0.00 N/A 1.834±0.00 1.283±0.00 1.007±0.00 0.386±0.00 1.412±0.00 1.109±0.00 0.961±0.00 0.250±0.00 0.413±0.26 0.845±0.63 1.518±0.48
ENSG00000249307 ENST00000437737 0.956±0.00 1.768±0.00 N/A N/A 0.575±0.41 N/A N/A 0.928±0.00 0.208±0.00 1.028±0.00 N/A 0.647±0.00 N/A 1.678±0.00
ENST00000505149 N/A N/A N/A 1.431±1.08 N/A 1.422±0.00 N/A N/A N/A 0.237±0.00 N/A N/A 0.383±0.00 0.690±0.00
ENST00000507476 N/A N/A N/A N/A 0.277±0.00 N/A N/A N/A N/A N/A N/A N/A 0.267±0.00 N/A
ENST00000507761 0.282±0.00 N/A 0.050±0.00 N/A 0.372±0.04 N/A 0.271±0.16 0.028±0.00 N/A 0.281±0.00 N/A N/A N/A 1.879±0.00
ENST00000509088 0.388±0.00 0.756±0.00 N/A 1.543±1.06 N/A 1.279±0.00 0.280±0.00 1.434±0.00 N/A 0.325±0.00 N/A 0.333±0.12 0.678±0.24 1.925±0.14
ENST00000510667 N/A N/A N/A N/A 0.533±0.00 1.742±0.00 0.421±0.00 1.402±0.00 0.045±0.00 0.269±0.00 1.451±0.00 0.642±0.15 0.351±0.12 N/A
ENST00000511241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511895 N/A 0.913±0.00 N/A 1.074±0.00 N/A 0.256±0.00 N/A 0.342±0.21 0.064±0.00 0.184±0.00 N/A N/A N/A 0.566±0.00
ENST00000512130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.580±0.00 N/A 0.189±0.00 N/A
ENST00000513153 N/A N/A N/A 1.775±0.00 0.131±0.00 1.411±0.00 0.395±0.00 N/A N/A N/A N/A 0.866±0.67 0.121±0.00 1.487±0.59
ENST00000515597 N/A N/A N/A 0.450±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249646 ENST00000502331 N/A N/A N/A N/A N/A 0.183±0.00 N/A N/A N/A N/A N/A N/A 0.047±0.00 0.239±0.00
ENST00000601375 0.201±0.00 0.961±0.00 0.145±0.00 0.312±0.00 0.158±0.00 0.235±0.09 0.195±0.00 0.362±0.00 0.069±0.00 0.026±0.00 0.462±0.00 0.503±0.61 0.144±0.02 0.406±0.27
ENSG00000250334 ENST00000508174 0.233±0.00 0.339±0.00 0.090±0.00 N/A N/A 0.039±0.00 0.165±0.10 N/A N/A 0.160±0.00 N/A 0.088±0.03 0.006±0.00 0.128±0.03
ENST00000515544 0.400±0.00 0.491±0.00 0.091±0.00 0.029±0.00 0.389±0.12 0.150±0.11 0.068±0.00 0.152±0.00 0.133±0.00 0.046±0.00 0.443±0.35 0.060±0.05 0.072±0.05 0.213±0.11
ENSG00000251399 ENST00000513155 0.302±0.00 0.232±0.00 N/A N/A N/A 0.179±0.00 0.495±0.00 0.161±0.00 N/A N/A N/A 0.096±0.00 N/A 0.273±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000046000 ENSMUST00000060265 0.012±0.00 N/A N/A 0.008±0.00 N/A 0.027±0.00 0.010±0.00 0.019±0.01 0.015±0.00 0.014±0.00 0.014±0.00 0.425±0.25 0.196±0.11 5.402±2.06
ENSMUSG00000050553 ENSMUST00000059657 N/A N/A N/A 0.009±0.00 N/A 0.137±0.09 0.048±0.02 0.064±0.02 N/A N/A N/A N/A 0.003±0.00 152.008±22.02
ENSMUSG00000067161 ENSMUST00000086918 1.349±0.59 0.238±0.12 0.035±0.01 0.093±0.08 0.983±0.24 2.058±1.12 0.657±0.30 1.751±0.98 0.143±0.14 0.652±0.04 N/A 1.551±0.94 0.017±0.00 0.079±0.04
ENSMUSG00000097516 ENSMUST00000180634 N/A N/A N/A 0.016±0.01 N/A N/A N/A N/A N/A N/A N/A N/A 0.004±0.00 0.309±0.09
ENSMUST00000181724 N/A N/A N/A N/A N/A N/A N/A N/A 0.004±0.00 N/A N/A 0.027±0.00 0.014±0.00 0.821±0.34

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