C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000830_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs386 VISTA 9606 19:31015544-31616146
GeneTranscriptPositionBiotype
ENSG00000121297 (TSHZ3)
teashirt zinc finger homeobox 3 		ENST00000240587 (TSHZ3-001) 31274945-31349547 protein_coding
ENST00000558569 (TSHZ3-002) 31308345-31349255 protein_coding
ENST00000560707 (TSHZ3-003) 31279194-31305763 processed_transcript
ENSG00000261400 (AC011525.2)
 ENST00000562167 (AC011525.2-001) 31588040-31595720 lincRNA
ENSG00000267407 (CTD-2050I18.1)
 ENST00000593063 (CTD-2050I18.1-001) 31542039-31554797 lincRNA
ENSG00000267465 (AC011525.4)
 ENST00000590611 (AC011525.4-003) 31588255-31593781 lincRNA
ENST00000592644 (AC011525.4-001) 31592281-31593039 lincRNA
ENST00000592788 (AC011525.4-002) 31588196-31592763 lincRNA
ENSG00000267599 (CTD-2050I18.2)
 ENST00000587779 (CTD-2050I18.2-001) 31465653-31466431 lincRNA
ENSG00000267636 (AC008992.1)
 ENST00000591132 (AC008992.1-001) 31421997-31427302 lincRNA
ENSG00000267662 (AC007796.1)
 ENST00000585336 (AC007796.1-001) 31348881-31417794 antisense
ENSG00000267777 (CTC-439O9.3)
 ENST00000589511 (CTC-439O9.3-001) 31167516-31207663 lincRNA
ENSG00000278875 (CTC-439O9.1)
 ENST00000625085 (CTC-439O9.1-001) 31364297-31366098 TEC
CIL_000830_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs386 VISTA 10090 7:36431579-37032162
GeneTranscriptPositionBiotype
ENSMUSG00000021217 (Tshz3)
teashirt zinc finger family member 3 		ENSMUST00000021641 (Tshz3-001) 36698118-36773553 protein_coding
ENSMUST00000176413 (Tshz3-002) 36698217-36702113 processed_transcript
ENSMUSG00000089273 (Gm24550)
predicted gene, 24550 		ENSMUST00000158648 (Gm24550-201) 36751195-36751473 misc_RNA
ENSMUSG00000101965 (RP23-330B16.1)
predicted gene 29129 		ENSMUST00000191121 (RP23-330B16.1-001) 36568743-36573095 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000830_0001ENSG00000121297ENST00000240587ENST00000558569ENST00000560707ENSG00000261400ENST00000562167ENSG00000267407ENST00000593063ENSG00000267465ENST00000590611ENST00000592644ENST00000592788ENSG00000267599ENST00000587779ENSG00000267636ENST00000591132ENSG00000267662ENST00000585336ENSG00000267777ENST00000589511ENSG00000278875ENST00000625085CIL_000830_0002ENSMUSG00000021217ENSMUST00000021641ENSMUST00000176413ENSMUSG00000089273ENSMUST00000158648ENSMUSG00000101965ENSMUST00000191121
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000830_0001ENSG00000121297ENST00000240587ENSG00000261400ENST00000562167ENSG00000267407ENST00000593063ENSG00000267465ENST00000590611ENST00000592788ENSG00000267599ENST00000587779ENSG00000267636ENST00000591132ENSG00000267662ENST00000585336ENSG00000267777ENST00000589511ENSG00000278875ENST00000625085CIL_000830_0002ENSMUSG00000021217ENSMUST00000021641ENSMUSG00000089273ENSMUST00000158648ENSMUSG00000101965ENSMUST00000191121
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000121297 ENST00000240587 2.965±0.00 1.715±0.00 N/A 2.078±1.33 2.151±0.00 6.001±0.00 0.979±0.00 1.047±0.00 1.197±0.78 2.323±1.40 0.566±0.41 4.145±3.95 1.431±0.25 3.341±2.23
ENST00000558569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000261400 ENST00000562167 N/A N/A N/A 0.010±0.00 0.057±0.00 0.004±0.00 N/A N/A N/A N/A 0.022±0.00 N/A N/A 0.926±0.74
ENSG00000267407 ENST00000593063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.369±0.10
ENSG00000267465 ENST00000590611 N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.730±0.00
ENST00000592644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592788 0.031±0.00 0.162±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267599 ENST00000587779 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.155±0.00
ENSG00000267636 ENST00000591132 N/A N/A N/A 0.219±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267662 ENST00000585336 N/A N/A N/A 0.054±0.02 0.030±0.00 0.242±0.00 N/A N/A N/A N/A N/A N/A 0.055±0.00 0.067±0.01
ENSG00000267777 ENST00000589511 N/A 0.116±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.062±1.25
ENSG00000278875 ENST00000625085 0.020±0.00 0.039±0.00 N/A 0.133±0.11 0.033±0.02 0.212±0.12 0.103±0.00 0.077±0.00 0.151±0.15 0.048±0.03 N/A 0.388±0.37 0.027±0.00 0.170±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021217 ENSMUST00000021641 7.678±4.60 1.082±0.09 5.241±1.00 4.340±1.90 1.492±0.41 1.499±0.14 0.700±0.11 0.648±0.04 0.224±0.10 1.736±0.09 0.296±0.04 3.364±1.69 0.310±0.19 0.168±0.08
ENSMUST00000176413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000089273 ENSMUST00000158648 0.409±0.00 N/A N/A 0.234±0.16 N/A 0.610±0.00 N/A N/A N/A N/A N/A 0.734±0.32 0.270±0.23 N/A
ENSMUSG00000101965 ENSMUST00000191121 N/A N/A N/A 0.203±0.00 N/A N/A N/A N/A N/A 0.065±0.00 N/A 0.166±0.10 N/A N/A

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