C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008B9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs429 VISTA 9606 5:88583640-89184171
GeneTranscriptPositionBiotype
ENSG00000250377 (CTC-467M3.3)
 ENST00000508719 (CTC-467M3.3-001) 88692645-88693972 lincRNA
ENSG00000250705 (CTC-470C15.1)
 ENST00000509149 (CTC-470C15.1-001) 88602780-88603117 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0008B9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs429 VISTA 10090 13:83223874-83824381
GeneTranscriptPositionBiotype
ENSMUSG00000005583 (Mef2c)
myocyte enhancer factor 2C 		ENSMUST00000005722 (Mef2c-201) 83504034-83667079 protein_coding
ENSMUST00000163888 (Mef2c-202) 83504034-83667079 protein_coding
ENSMUST00000185052 (Mef2c-001) 83573607-83664472 protein_coding
ENSMUSG00000050334 (C130071C03Rik)
RIKEN cDNA C130071C03 gene 		ENSMUST00000052354 (C130071C03Rik-201) 83738881-83741307 lincRNA
ENSMUST00000131907 (C130071C03Rik-001) 83721381-83741308 lincRNA
ENSMUST00000182701 (C130071C03Rik-003) 83732566-83735521 lincRNA
ENSMUST00000182788 (C130071C03Rik-002) 83728106-83735669 lincRNA
ENSMUST00000185281 (C130071C03Rik-005) 83721381-83872680 lincRNA
ENSMUST00000187663 (C130071C03Rik-006) 83738863-83884194 lincRNA
ENSMUSG00000097265 (Gm26803)
predicted gene, 26803 		ENSMUST00000181705 (Gm26803-001) 83723442-83729582 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008B9_0001ENSG00000250377ENST00000508719ENSG00000250705ENST00000509149CIL_0008B9_0002ENSMUSG00000005583ENSMUST00000005722ENSMUST00000163888ENSMUST00000185052ENSMUSG00000050334ENSMUST00000052354ENSMUST00000131907ENSMUST00000182701ENSMUST00000182788ENSMUST00000185281ENSMUST00000187663ENSMUSG00000097265ENSMUST00000181705
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008B9_0001ENSG00000250377ENST00000508719ENSG00000250705ENST00000509149CIL_0008B9_0002ENSMUSG00000005583ENSMUST00000005722ENSMUST00000163888ENSMUST00000185052ENSMUSG00000050334ENSMUST00000052354ENSMUST00000131907ENSMUST00000185281ENSMUSG00000097265ENSMUST00000181705
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000250377 ENST00000508719 N/A 0.032±0.00 N/A 0.330±0.01 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.056±0.03
ENSG00000250705 ENST00000509149 0.111±0.00 0.057±0.00 N/A 0.063±0.00 0.058±0.00 0.677±0.52 0.053±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005583 ENSMUST00000005722 1.129±0.00 0.568±0.00 0.987±0.00 1.168±0.22 2.894±0.00 N/A 1.452±0.00 0.705±0.00 0.274±0.00 N/A 38.086±3.46 N/A N/A 0.096±0.00
ENSMUST00000163888 2.046±0.55 0.883±0.12 3.520±0.00 4.666±0.21 5.271±0.80 0.489±0.13 2.609±0.35 0.737±0.27 0.162±0.22 2.902±0.63 30.402±3.33 2.046±0.37 0.215±0.00 0.116±0.00
ENSMUST00000185052 2.084±0.95 7.241±1.75 N/A 10.491±9.13 10.420±2.97 2.352±0.18 2.777±0.00 1.288±0.29 0.195±0.07 4.151±0.72 N/A 9.927±2.49 0.242±0.00 0.666±0.12
ENSMUSG00000050334 ENSMUST00000052354 N/A N/A 0.171±0.06 73.278±64.03 N/A 0.064±0.00 0.013±0.00 0.124±0.02 0.128±0.22 N/A 0.020±0.01 0.009±0.00 0.035±0.01 N/A
ENSMUST00000131907 N/A N/A 0.041±0.00 5.707±2.69 N/A 0.063±0.00 N/A N/A N/A N/A N/A N/A 0.004±0.00 N/A
ENSMUST00000182701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185281 N/A N/A N/A N/A N/A N/A N/A 0.129±0.01 N/A N/A 0.161±0.00 N/A N/A N/A
ENSMUST00000187663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097265 ENSMUST00000181705 N/A N/A 0.004±0.00 1.528±0.07 N/A N/A N/A 0.036±0.01 0.005±0.00 N/A N/A N/A N/A N/A

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