C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008CP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1565 VISTA 9606 2:66899970-67504365
GeneTranscriptPositionBiotype
ENSG00000143971 (ETAA1)
Ewing tumor-associated antigen 1 		ENST00000272342 (ETAA1-001) 67397319-67410545 protein_coding
ENST00000462772 (ETAA1-002) 67402794-67405335 processed_transcript
ENSG00000223859 (AC007403.3)
 ENST00000427579 (AC007403.3-001) 67040546-67041966 lincRNA
ENSG00000230525 (AC007403.2)
 ENST00000411701 (AC007403.2-001) 66921694-66958920 lincRNA
ENST00000426260 (AC007403.2-002) 66904436-66971462 lincRNA
ENSG00000232688 (AC007403.1)
 ENST00000444266 (AC007403.1-001) 66921510-66922457 lincRNA
ENSG00000235885 (AC023115.2)
 ENST00000445514 (AC023115.2-006) 67213408-67244574 lincRNA
ENST00000450294 (AC023115.2-001) 67260803-67289394 lincRNA
ENST00000452716 (AC023115.2-002) 67086446-67296075 lincRNA
ENST00000593336 (AC023115.2-004) 67261066-67289370 lincRNA
ENST00000594329 (AC023115.2-005) 67087013-67257966 lincRNA
ENST00000598583 (AC023115.2-003) 67261066-67289238 lincRNA
ENST00000618608 (AC023115.2-007) 67252618-67261170 lincRNA
ENSG00000236605 (AC023115.4)
 ENST00000450944 (AC023115.4-001) 67324627-67325304 lincRNA
ENSG00000236780 (AC078941.1)
 ENST00000414404 (AC078941.1-002) 67175423-67215277 lincRNA
ENST00000433133 (AC078941.1-001) 67123357-67215319 lincRNA
ENST00000447453 (AC078941.1-003) 67124670-67177992 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0008CP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1565 VISTA 10090 11:17861774-18465394
GeneTranscriptPositionBiotype
ENSMUSG00000016984 (Etaa1)
Ewing tumor-associated antigen 1 		ENSMUST00000076661 (Etaa1-001) 17938756-17953875 protein_coding
ENSMUSG00000080826 (Gm12019)
predicted gene 12019 		ENSMUST00000121258 (Gm12019-001) 18206413-18206944 processed_pseudogene
ENSMUSG00000081302 (Gm12020)
predicted gene 12020 		ENSMUST00000119030 (Gm12020-001) 18325630-18327671 processed_pseudogene
ENSMUSG00000084413 (Gm12017)
predicted gene 12017 		ENSMUST00000122453 (Gm12017-001) 17973788-17974790 processed_pseudogene
ENSMUSG00000085453 (Gm12018)
predicted gene 12018 		ENSMUST00000150694 (Gm12018-001) 18095986-18103384 lincRNA
ENSMUSG00000086468 (Etaa1os)
Ewing tumor-associated antigen 1, opposite strand 		ENSMUST00000140161 (Etaa1os-002) 17953970-17959578 antisense
ENSMUST00000148496 (Etaa1os-001) 17954004-17955098 antisense

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008CP_0001ENSG00000143971ENST00000272342ENST00000462772ENSG00000223859ENST00000427579ENSG00000230525ENST00000411701ENST00000426260ENSG00000232688ENST00000444266ENSG00000235885ENST00000445514ENST00000450294ENST00000452716ENST00000593336ENST00000594329ENST00000598583ENST00000618608ENSG00000236605ENST00000450944ENSG00000236780ENST00000414404ENST00000433133ENST00000447453CIL_0008CP_0002ENSMUSG00000016984ENSMUST00000076661ENSMUSG00000080826ENSMUST00000121258ENSMUSG00000081302ENSMUST00000119030ENSMUSG00000084413ENSMUST00000122453ENSMUSG00000085453ENSMUST00000150694ENSMUSG00000086468ENSMUST00000140161ENSMUST00000148496
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008CP_0001ENSG00000143971ENST00000272342ENSG00000223859ENST00000427579ENSG00000230525ENST00000411701ENST00000426260ENSG00000232688ENST00000444266ENSG00000235885ENST00000445514ENST00000450294ENST00000452716ENST00000593336ENST00000594329ENST00000598583ENST00000618608ENSG00000236605ENST00000450944ENSG00000236780ENST00000414404ENST00000433133ENST00000447453CIL_0008CP_0002ENSMUSG00000016984ENSMUST00000076661ENSMUSG00000080826ENSMUST00000121258ENSMUSG00000081302ENSMUST00000119030ENSMUSG00000084413ENSMUST00000122453ENSMUSG00000085453ENSMUST00000150694ENSMUSG00000086468ENSMUST00000140161ENSMUST00000148496
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143971 ENST00000272342 1.243±0.00 1.313±0.00 2.221±0.00 1.623±0.50 0.737±0.04 1.015±0.09 0.777±0.19 2.706±0.00 1.542±0.72 1.086±0.20 0.121±0.00 1.834±0.55 0.923±0.59 3.354±0.24
ENST00000462772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223859 ENST00000427579 N/A N/A N/A 0.040±0.00 N/A 0.034±0.00 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000230525 ENST00000411701 N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A 0.374±0.00 N/A 0.150±0.00 N/A 0.099±0.03
ENST00000426260 N/A N/A N/A N/A N/A N/A N/A N/A 0.796±0.00 N/A N/A 0.125±0.12 N/A 0.216±0.00
ENSG00000232688 ENST00000444266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.526±0.00
ENSG00000235885 ENST00000445514 N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A
ENST00000450294 N/A 0.115±0.00 N/A 0.057±0.00 N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A
ENST00000452716 N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593336 N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A
ENST00000594329 0.014±0.00 0.134±0.00 N/A 0.076±0.00 0.074±0.00 0.217±0.00 0.148±0.00 0.089±0.00 0.078±0.00 0.192±0.00 0.130±0.00 0.016±0.00 N/A 0.080±0.00
ENST00000598583 0.146±0.00 0.056±0.00 N/A 0.039±0.00 N/A 0.061±0.00 N/A 0.073±0.00 N/A 0.145±0.00 N/A N/A 0.090±0.00 0.051±0.00
ENST00000618608 N/A N/A 0.372±0.00 N/A N/A N/A N/A N/A 0.059±0.00 N/A N/A N/A 0.024±0.00 0.044±0.00
ENSG00000236605 ENST00000450944 N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A 0.074±0.00
ENSG00000236780 ENST00000414404 N/A N/A 0.380±0.00 0.108±0.00 0.337±0.22 1.312±0.47 N/A N/A N/A 0.257±0.00 N/A 0.203±0.00 0.067±0.01 0.131±0.00
ENST00000433133 N/A N/A 0.074±0.00 N/A N/A 0.035±0.00 N/A N/A N/A 0.021±0.00 N/A 0.060±0.05 N/A 0.004±0.00
ENST00000447453 N/A 0.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.076±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016984 ENSMUST00000076661 1.126±0.47 1.351±0.85 2.324±0.01 2.659±1.17 0.885±0.33 1.241±0.51 0.398±0.04 0.815±0.20 2.065±1.94 1.399±0.33 0.372±0.07 1.850±0.56 2.960±1.18 0.653±0.12
ENSMUSG00000080826 ENSMUST00000121258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.090±0.00
ENSMUSG00000081302 ENSMUST00000119030 N/A N/A 0.003±0.00 0.011±0.00 N/A N/A N/A N/A 0.025±0.01 N/A N/A 0.012±0.00 0.014±0.01 0.622±0.98
ENSMUSG00000084413 ENSMUST00000122453 0.127±0.07 0.059±0.00 0.361±0.25 0.265±0.09 0.317±0.27 0.135±0.12 0.165±0.04 0.118±0.07 0.164±0.20 0.067±0.04 0.061±0.01 0.140±0.06 0.115±0.14 0.068±0.04
ENSMUSG00000085453 ENSMUST00000150694 0.017±0.00 N/A 0.002±0.00 0.013±0.00 N/A N/A 0.008±0.00 0.036±0.00 N/A N/A N/A 0.011±0.00 0.009±0.00 0.319±0.16
ENSMUSG00000086468 ENSMUST00000140161 0.220±0.04 N/A 1.071±0.32 0.168±0.04 N/A 0.415±0.12 0.226±0.00 0.543±0.18 0.462±0.13 0.190±0.00 0.214±0.07 0.356±0.20 0.325±0.10 0.353±0.00
ENSMUST00000148496 1.922±0.62 2.314±1.04 2.093±0.64 0.836±0.24 3.060±2.52 1.009±0.88 0.398±0.04 2.242±0.65 0.823±0.41 1.660±1.26 0.208±0.03 1.147±0.54 0.443±0.19 21.189±10.33

Loading