C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008CP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1565 VISTA 9606 2:66899970-67504365
GeneTranscriptPositionBiotype
ENSG00000143971 (ETAA1)
Ewing tumor-associated antigen 1 		ENST00000272342 (ETAA1-001) 67397319-67410545 protein_coding
ENST00000462772 (ETAA1-002) 67402794-67405335 processed_transcript
ENSG00000223859 (AC007403.3)
 ENST00000427579 (AC007403.3-001) 67040546-67041966 lincRNA
ENSG00000230525 (AC007403.2)
 ENST00000411701 (AC007403.2-001) 66921694-66958920 lincRNA
ENST00000426260 (AC007403.2-002) 66904436-66971462 lincRNA
ENSG00000232688 (AC007403.1)
 ENST00000444266 (AC007403.1-001) 66921510-66922457 lincRNA
ENSG00000235885 (AC023115.2)
 ENST00000445514 (AC023115.2-006) 67213408-67244574 lincRNA
ENST00000450294 (AC023115.2-001) 67260803-67289394 lincRNA
ENST00000452716 (AC023115.2-002) 67086446-67296075 lincRNA
ENST00000593336 (AC023115.2-004) 67261066-67289370 lincRNA
ENST00000594329 (AC023115.2-005) 67087013-67257966 lincRNA
ENST00000598583 (AC023115.2-003) 67261066-67289238 lincRNA
ENST00000618608 (AC023115.2-007) 67252618-67261170 lincRNA
ENSG00000236605 (AC023115.4)
 ENST00000450944 (AC023115.4-001) 67324627-67325304 lincRNA
ENSG00000236780 (AC078941.1)
 ENST00000414404 (AC078941.1-002) 67175423-67215277 lincRNA
ENST00000433133 (AC078941.1-001) 67123357-67215319 lincRNA
ENST00000447453 (AC078941.1-003) 67124670-67177992 lincRNA
CIL_0008CP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1565 VISTA 10090 11:17861774-18465394
GeneTranscriptPositionBiotype
ENSMUSG00000016984 (Etaa1)
Ewing tumor-associated antigen 1 		ENSMUST00000076661 (Etaa1-001) 17938756-17953875 protein_coding
ENSMUSG00000080826 (Gm12019)
predicted gene 12019 		ENSMUST00000121258 (Gm12019-001) 18206413-18206944 processed_pseudogene
ENSMUSG00000081302 (Gm12020)
predicted gene 12020 		ENSMUST00000119030 (Gm12020-001) 18325630-18327671 processed_pseudogene
ENSMUSG00000084413 (Gm12017)
predicted gene 12017 		ENSMUST00000122453 (Gm12017-001) 17973788-17974790 processed_pseudogene
ENSMUSG00000085453 (Gm12018)
predicted gene 12018 		ENSMUST00000150694 (Gm12018-001) 18095986-18103384 lincRNA
ENSMUSG00000086468 (Etaa1os)
Ewing tumor-associated antigen 1, opposite strand 		ENSMUST00000140161 (Etaa1os-002) 17953970-17959578 antisense
ENSMUST00000148496 (Etaa1os-001) 17954004-17955098 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008CP_0001ENSG00000143971ENST00000272342ENST00000462772ENSG00000223859ENST00000427579ENSG00000230525ENST00000411701ENST00000426260ENSG00000232688ENST00000444266ENSG00000235885ENST00000445514ENST00000450294ENST00000452716ENST00000593336ENST00000594329ENST00000598583ENST00000618608ENSG00000236605ENST00000450944ENSG00000236780ENST00000414404ENST00000433133ENST00000447453CIL_0008CP_0002ENSMUSG00000016984ENSMUST00000076661ENSMUSG00000080826ENSMUST00000121258ENSMUSG00000081302ENSMUST00000119030ENSMUSG00000084413ENSMUST00000122453ENSMUSG00000085453ENSMUST00000150694ENSMUSG00000086468ENSMUST00000140161ENSMUST00000148496
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008CP_0001ENSG00000143971ENST00000272342ENSG00000223859ENST00000427579ENSG00000230525ENST00000411701ENST00000426260ENSG00000232688ENST00000444266ENSG00000235885ENST00000445514ENST00000450294ENST00000452716ENST00000593336ENST00000594329ENST00000598583ENST00000618608ENSG00000236605ENST00000450944ENSG00000236780ENST00000414404ENST00000433133ENST00000447453CIL_0008CP_0002ENSMUSG00000016984ENSMUST00000076661ENSMUSG00000080826ENSMUST00000121258ENSMUSG00000081302ENSMUST00000119030ENSMUSG00000084413ENSMUST00000122453ENSMUSG00000085453ENSMUST00000150694ENSMUSG00000086468ENSMUST00000140161ENSMUST00000148496
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143971 ENST00000272342 1.243±0.00 1.313±0.00 2.221±0.00 1.623±0.50 0.737±0.04 1.015±0.09 0.777±0.19 2.706±0.00 1.542±0.72 1.086±0.20 0.121±0.00 1.834±0.55 0.923±0.59 3.354±0.24
ENST00000462772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000223859 ENST00000427579 N/A N/A N/A 0.040±0.00 N/A 0.034±0.00 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000230525 ENST00000411701 N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A 0.374±0.00 N/A 0.150±0.00 N/A 0.099±0.03
ENST00000426260 N/A N/A N/A N/A N/A N/A N/A N/A 0.796±0.00 N/A N/A 0.125±0.12 N/A 0.216±0.00
ENSG00000232688 ENST00000444266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.526±0.00
ENSG00000235885 ENST00000445514 N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A N/A
ENST00000450294 N/A 0.115±0.00 N/A 0.057±0.00 N/A N/A N/A N/A N/A N/A N/A 0.077±0.00 N/A N/A
ENST00000452716 N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593336 N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A N/A N/A
ENST00000594329 0.014±0.00 0.134±0.00 N/A 0.076±0.00 0.074±0.00 0.217±0.00 0.148±0.00 0.089±0.00 0.078±0.00 0.192±0.00 0.130±0.00 0.016±0.00 N/A 0.080±0.00
ENST00000598583 0.146±0.00 0.056±0.00 N/A 0.039±0.00 N/A 0.061±0.00 N/A 0.073±0.00 N/A 0.145±0.00 N/A N/A 0.090±0.00 0.051±0.00
ENST00000618608 N/A N/A 0.372±0.00 N/A N/A N/A N/A N/A 0.059±0.00 N/A N/A N/A 0.024±0.00 0.044±0.00
ENSG00000236605 ENST00000450944 N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A 0.074±0.00
ENSG00000236780 ENST00000414404 N/A N/A 0.380±0.00 0.108±0.00 0.337±0.22 1.312±0.47 N/A N/A N/A 0.257±0.00 N/A 0.203±0.00 0.067±0.01 0.131±0.00
ENST00000433133 N/A N/A 0.074±0.00 N/A N/A 0.035±0.00 N/A N/A N/A 0.021±0.00 N/A 0.060±0.05 N/A 0.004±0.00
ENST00000447453 N/A 0.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.076±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000016984 ENSMUST00000076661 1.126±0.47 1.351±0.85 2.324±0.01 2.659±1.17 0.885±0.33 1.241±0.51 0.398±0.04 0.815±0.20 2.065±1.94 1.399±0.33 0.372±0.07 1.850±0.56 2.960±1.18 0.653±0.12
ENSMUSG00000080826 ENSMUST00000121258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.090±0.00
ENSMUSG00000081302 ENSMUST00000119030 N/A N/A 0.003±0.00 0.011±0.00 N/A N/A N/A N/A 0.025±0.01 N/A N/A 0.012±0.00 0.014±0.01 0.622±0.98
ENSMUSG00000084413 ENSMUST00000122453 0.127±0.07 0.059±0.00 0.361±0.25 0.265±0.09 0.317±0.27 0.135±0.12 0.165±0.04 0.118±0.07 0.164±0.20 0.067±0.04 0.061±0.01 0.140±0.06 0.115±0.14 0.068±0.04
ENSMUSG00000085453 ENSMUST00000150694 0.017±0.00 N/A 0.002±0.00 0.013±0.00 N/A N/A 0.008±0.00 0.036±0.00 N/A N/A N/A 0.011±0.00 0.009±0.00 0.319±0.16
ENSMUSG00000086468 ENSMUST00000140161 0.220±0.04 N/A 1.071±0.32 0.168±0.04 N/A 0.415±0.12 0.226±0.00 0.543±0.18 0.462±0.13 0.190±0.00 0.214±0.07 0.356±0.20 0.325±0.10 0.353±0.00
ENSMUST00000148496 1.922±0.62 2.314±1.04 2.093±0.64 0.836±0.24 3.060±2.52 1.009±0.88 0.398±0.04 2.242±0.65 0.823±0.41 1.660±1.26 0.208±0.03 1.147±0.54 0.443±0.19 21.189±10.33

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