C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12017
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122453 Gm12017-001 ENSMUSG00000084413 10090 - 11:17973788-17974790 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000122453
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000122453 0.127±0.07 0.059±0.00 0.361±0.25 0.265±0.09 0.317±0.27 0.135±0.12 0.165±0.04 0.118±0.07 0.164±0.20 0.067±0.04 0.061±0.01 0.140±0.06 0.115±0.14 0.068±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JR CIL_0007JR_0004 UCNEbase 11:17198316-19679637
CIL_0008CP CIL_0008CP_0002 VISTA 11:17861774-18465394
CIL_0007V8 CIL_0007V8_0002 VISTA 11:17870843-18472953

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 368
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1077
ENST00000328713 GAPDHP24-001 processed_pseudogene Homo_sapiens 0 501
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 870
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1057
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1077
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1077
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 514
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 880
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 776
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 898
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 773
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 761
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 717
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 963
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 822
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 636
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 771
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 702
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 545
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 592
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 2e-30 134
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 462
ENST00000450472 GAPDHP14-001 processed_pseudogene Homo_sapiens 0 436
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1026
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 566
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 870
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 870
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 536
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 754
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 789
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 782
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 595
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 259
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 808
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 780
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 843
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 538
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 1013

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