C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12020
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119030 Gm12020-001 ENSMUSG00000081302 10090 - 11:18325630-18327671 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryPlacentaTestisENSMUST00000119030
Transcript ID Bladder Brain Liver Ovary Placenta Testis
ENSMUST00000119030 0.003±0.00 0.011±0.00 0.025±0.01 0.012±0.00 0.014±0.01 0.622±0.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JR CIL_0007JR_0004 UCNEbase 11:17198316-19679637
CIL_0008CP CIL_0008CP_0002 VISTA 11:17861774-18465394
CIL_0007V8 CIL_0007V8_0002 VISTA 11:17870843-18472953
CIL_000805 CIL_000805_0002 VISTA 11:18056946-18658282
CIL_0007XO CIL_0007XO_0002 VISTA 11:18304266-18905268

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322723 NCL-001 protein_coding Homo_sapiens 0 279
ENST00000356936 NCL-015 protein_coding Homo_sapiens 0 220
ENST00000436894 NCL-013 protein_coding Homo_sapiens 0 315
ENST00000461347 NCL-002 retained_intron Homo_sapiens 0 279
ENST00000527320 RP11-672A2.7-001 processed_pseudogene Homo_sapiens 5e-34 147

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