C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008FZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1130 VISTA 9606 5:157862021-158463469
GeneTranscriptPositionBiotype
ENSG00000213414 (CTB-47B8.5)
 ENST00000519230 (CTB-47B8.5-001) 157986146-157987706 processed_pseudogene
ENSG00000244331 (CTB-47B8.1)
 ENST00000460082 (CTB-47B8.1-001) 157931258-157931563 processed_pseudogene
ENSG00000253424 (CTC-436K13.3)
 ENST00000518103 (CTC-436K13.3-001) 158256137-158258436 lincRNA
ENSG00000253449 (CTC-436K13.6)
 ENST00000523178 (CTC-436K13.6-001) 158225352-158234376 lincRNA
ENSG00000253673 (CTC-436K13.1)
 ENST00000522975 (CTC-436K13.1-001) 158175396-158200016 lincRNA
ENSG00000253743 (MARK2P11)
MAP/microtubule affinity-regulating kinase 2 pseudogene 11 		ENST00000518523 (MARK2P11-001) 157984658-157989990 unprocessed_pseudogene
ENSG00000253792 (CTC-436K13.5)
 ENST00000522769 (CTC-436K13.5-001) 158173601-158176422 lincRNA
ENSG00000254047 (CTC-436K13.4)
 ENST00000518624 (CTC-436K13.4-001) 158188977-158189911 processed_pseudogene
ENSG00000254350 (RP11-542A14.1)
 ENST00000517595 (RP11-542A14.1-001) 158424585-158452758 lincRNA
ENSG00000276778 (RP11-524N5.1)
 ENST00000619068 (RP11-524N5.1-001) 158320683-158409773 lincRNA

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_0008FZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1130 VISTA 10090 11:45249892-45851315
GeneTranscriptPositionBiotype
ENSMUSG00000076031 (Gm22751)
predicted gene, 22751 		ENSMUST00000102077 (Gm22751-201) 45829779-45829887 miRNA
ENSMUSG00000077320 (Gm22284)
predicted gene, 22284 		ENSMUST00000104132 (Gm22284-201) 45639383-45639514 snoRNA
ENSMUSG00000080981 (Gm12161)
predicted gene 12161 		ENSMUST00000121454 (Gm12161-001) 45280594-45280954 processed_pseudogene
ENSMUSG00000081251 (Gm12164)
predicted gene 12164 		ENSMUST00000121695 (Gm12164-001) 45829319-45829869 processed_pseudogene
ENSMUSG00000083017 (Gm12163)
predicted gene 12163 		ENSMUST00000121597 (Gm12163-001) 45813604-45813992 processed_pseudogene
ENSMUSG00000086686 (F630206G17Rik)
RIKEN cDNA F630206G17 gene 		ENSMUST00000137002 (F630206G17Rik-001) 45808087-45841171 processed_transcript

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008FZ_0001ENSG00000213414ENST00000519230ENSG00000244331ENST00000460082ENSG00000253424ENST00000518103ENSG00000253449ENST00000523178ENSG00000253673ENST00000522975ENSG00000253743ENST00000518523ENSG00000253792ENST00000522769ENSG00000254047ENST00000518624ENSG00000254350ENST00000517595ENSG00000276778ENST00000619068CIL_0008FZ_0002ENSMUSG00000076031ENSMUST00000102077ENSMUSG00000077320ENSMUST00000104132ENSMUSG00000080981ENSMUST00000121454ENSMUSG00000081251ENSMUST00000121695ENSMUSG00000083017ENSMUST00000121597ENSMUSG00000086686ENSMUST00000137002
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008FZ_0001ENSG00000213414ENST00000519230ENSG00000244331ENST00000460082ENSG00000253424ENST00000518103ENSG00000253449ENST00000523178ENSG00000253673ENST00000522975ENSG00000253743ENST00000518523ENSG00000253792ENST00000522769ENSG00000254047ENST00000518624ENSG00000254350ENST00000517595ENSG00000276778ENST00000619068CIL_0008FZ_0002ENSMUSG00000076031ENSMUST00000102077ENSMUSG00000077320ENSMUST00000104132ENSMUSG00000080981ENSMUST00000121454ENSMUSG00000081251ENSMUST00000121695ENSMUSG00000083017ENSMUST00000121597ENSMUSG00000086686ENSMUST00000137002
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000213414 ENST00000519230 N/A N/A N/A N/A N/A 0.076±0.04 N/A N/A N/A N/A 0.014±0.00 N/A N/A 0.015±0.00
ENSG00000244331 ENST00000460082 0.718±0.00 1.371±0.00 N/A 0.085±0.00 0.730±0.00 0.373±0.00 0.214±0.00 0.239±0.00 0.070±0.00 0.910±0.00 0.865±0.00 N/A N/A 0.193±0.09
ENSG00000253424 ENST00000518103 N/A N/A N/A 0.090±0.00 0.195±0.00 0.086±0.00 0.577±0.00 N/A 1.197±0.00 0.219±0.00 N/A 0.276±0.09 0.060±0.01 0.334±0.25
ENSG00000253449 ENST00000523178 0.081±0.00 0.311±0.00 N/A 0.153±0.00 0.211±0.00 0.121±0.00 0.029±0.00 0.176±0.00 0.068±0.00 0.181±0.00 N/A 0.038±0.00 N/A 0.088±0.00
ENSG00000253673 ENST00000522975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A N/A
ENSG00000253743 ENST00000518523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.020±0.00
ENSG00000253792 ENST00000522769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.100±0.00
ENSG00000254047 ENST00000518624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A
ENSG00000254350 ENST00000517595 0.067±0.00 N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00
ENSG00000276778 ENST00000619068 0.021±0.00 N/A N/A N/A N/A N/A 0.006±0.00 N/A N/A 0.037±0.03 N/A 0.034±0.00 N/A 0.005±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000076031 ENSMUST00000102077 N/A N/A N/A N/A 2056.150±0.00 N/A N/A N/A 1384.720±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000077320 ENSMUST00000104132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.370±0.00 N/A N/A
ENSMUSG00000080981 ENSMUST00000121454 0.701±0.37 0.659±0.26 0.300±0.24 0.467±0.14 0.751±0.62 1.087±0.51 0.495±0.14 0.744±0.43 0.501±0.30 0.357±0.10 0.123±0.00 2.576±1.50 0.195±0.17 0.277±0.13
ENSMUSG00000081251 ENSMUST00000121695 0.125±0.04 0.131±0.01 0.076±0.05 0.024±0.01 0.203±0.09 0.138±0.00 N/A 0.108±0.04 0.106±0.07 N/A N/A N/A 0.137±0.07 0.123±0.04
ENSMUSG00000083017 ENSMUST00000121597 N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A 0.097±0.00 0.214±0.00 N/A N/A
ENSMUSG00000086686 ENSMUST00000137002 0.083±0.00 N/A 0.029±0.00 N/A 0.172±0.05 N/A 0.061±0.00 N/A N/A 0.182±0.00 0.082±0.01 0.064±0.00 0.019±0.00 N/A

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