C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12161
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121454 Gm12161-001 ENSMUSG00000080981 10090 - 11:45280594-45280954 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121454
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121454 0.701±0.37 0.659±0.26 0.300±0.24 0.467±0.14 0.751±0.62 1.087±0.51 0.495±0.14 0.744±0.43 0.501±0.30 0.357±0.10 0.123±0.00 2.576±1.50 0.195±0.17 0.277±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AQ CIL_0005AQ_0002 CGP 11:44617317-45910625
CIL_0007N2 CIL_0007N2_0002 UCNEbase 11:44634884-45922375
CIL_0008GW CIL_0008GW_0002 VISTA 11:44687161-45288462
CIL_00080A CIL_00080A_0002 VISTA 11:44836390-45437667
CIL_0008LD CIL_0008LD_0002 VISTA 11:45088288-45690404
CIL_0008FZ CIL_0008FZ_0002 VISTA 11:45249892-45851315

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359626 TYW1-001 protein_coding Homo_sapiens 0 440
ENST00000361660 TYW1-002 nonsense_mediated_decay Homo_sapiens 0 311
ENST00000495971 TYW1-007 retained_intron Homo_sapiens 0 309
ENST00000615572 TYW1-201 protein_coding Homo_sapiens 0 303

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