C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460082 CTB-47B8.1-001 ENSG00000244331 9606 - 5:157931258-157931563 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleTestisENST00000460082
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Testis
ENST00000460082 0.718±0.00 1.371±0.00 0.085±0.00 0.730±0.00 0.373±0.00 0.214±0.00 0.239±0.00 0.070±0.00 0.910±0.00 0.865±0.00 0.193±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007N2 CIL_0007N2_0001 UCNEbase 5:157771686-159082579
CIL_00016F CIL_00016F_0002 CGP 5:157785743-159099761
CIL_0008FZ CIL_0008FZ_0001 VISTA 5:157862021-158463469

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106003 Rplp2-005 protein_coding Mus_musculus 0 313
ENSMUST00000106004 Rplp2-004 protein_coding Mus_musculus 0 313
ENSMUST00000084434 Rplp2-001 protein_coding Mus_musculus 0 313
ENSMUST00000062370 Wdr89-001 protein_coding Mus_musculus 0 313
ENSMUST00000191005 Rplp2-ps1-002 unprocessed_pseudogene Mus_musculus 0 300
ENSMUST00000134636 Rplp2-006 processed_transcript Mus_musculus 1e-36 156
ENSMUST00000117283 Gm15198-001 processed_pseudogene Mus_musculus 1e-31 139

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