C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008GU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm693 VISTA 9606 6:114061561-114664556
GeneTranscriptPositionBiotype
ENSG00000218089 (DNAJA1P4)
DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene 4 		ENST00000406473 (DNAJA1P4-001) 114349483-114350648 processed_pseudogene
ENSG00000226079 (RP3-399L15.2)
 ENST00000435802 (RP3-399L15.2-001) 114523451-114535875 lincRNA
ENSG00000232395 (RP3-399L15.1)
 ENST00000438522 (RP3-399L15.1-001) 114477350-114488681 lincRNA
ENST00000446358 (RP3-399L15.1-002) 114481425-114488752 lincRNA
ENSG00000249853 (HS3ST5)
heparan sulfate (glucosamine) 3-O-sulfotransferase 5 		ENST00000312719 (HS3ST5-001) 114055586-114343045 protein_coding
ENST00000411826 (HS3ST5-201) 114055586-114062877 protein_coding
ENST00000441954 (HS3ST5-002) 114167477-114168450 processed_transcript
CIL_0008GU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm693 VISTA 10090 10:36183581-36786087
GeneTranscriptPositionBiotype
ENSMUSG00000044499 (Hs3st5)
heparan sulfate (glucosamine) 3-O-sulfotransferase 5 		ENSMUST00000058738 (Hs3st5-001) 36506819-36834389 protein_coding
ENSMUST00000167191 (Hs3st5-002) 36506814-36833773 protein_coding
ENSMUST00000168572 (Hs3st5-004) 36507026-36834397 protein_coding
ENSMUST00000171521 (Hs3st5-005) 36507407-36810038 processed_transcript
ENSMUST00000172357 (Hs3st5-003) 36506889-36702949 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008GU_0001ENSG00000218089ENST00000406473ENSG00000226079ENST00000435802ENSG00000232395ENST00000438522ENST00000446358ENSG00000249853ENST00000312719ENST00000411826ENST00000441954CIL_0008GU_0002ENSMUSG00000044499ENSMUST00000058738ENSMUST00000167191ENSMUST00000168572ENSMUST00000171521ENSMUST00000172357
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008GU_0001ENSG00000218089ENST00000406473ENSG00000226079ENST00000435802ENSG00000232395ENST00000438522ENST00000446358ENSG00000249853ENST00000312719ENST00000411826ENST00000441954CIL_0008GU_0002ENSMUSG00000044499ENSMUST00000058738ENSMUST00000167191ENSMUST00000168572ENSMUST00000171521ENSMUST00000172357
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000218089 ENST00000406473 N/A N/A N/A 0.031±0.01 N/A N/A 0.009±0.00 N/A N/A N/A N/A N/A N/A 0.014±0.00
ENSG00000226079 ENST00000435802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.377±0.09
ENSG00000232395 ENST00000438522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.049±0.00 N/A
ENST00000446358 N/A N/A N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 0.242±0.04
ENSG00000249853 ENST00000312719 N/A N/A 0.120±0.00 1.301±0.00 0.046±0.03 0.134±0.00 N/A 0.028±0.00 0.230±0.00 0.091±0.02 N/A 0.024±0.02 N/A 0.124±0.03
ENST00000411826 N/A N/A N/A 0.464±0.24 N/A 0.076±0.01 0.029±0.03 0.108±0.00 N/A N/A 0.187±0.14 0.039±0.00 0.013±0.00 N/A
ENST00000441954 N/A N/A N/A N/A 0.299±0.00 N/A N/A N/A N/A N/A N/A 0.227±0.00 N/A 0.229±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000044499 ENSMUST00000058738 0.030±0.00 N/A 0.022±0.00 1.360±0.82 0.117±0.05 0.095±0.00 0.151±0.00 N/A N/A N/A N/A 0.089±0.07 N/A N/A
ENSMUST00000167191 0.100±0.05 0.099±0.00 0.013±0.00 2.464±0.63 0.091±0.05 0.158±0.03 0.188±0.03 0.041±0.03 0.011±0.00 0.073±0.00 0.496±0.07 0.180±0.08 N/A N/A
ENSMUST00000168572 N/A N/A 0.034±0.00 1.083±0.38 N/A N/A N/A N/A 0.020±0.00 N/A 0.477±0.00 0.102±0.00 N/A 0.013±0.00
ENSMUST00000171521 0.125±0.01 N/A N/A N/A N/A 0.335±0.36 N/A 0.125±0.00 N/A N/A N/A 0.501±0.22 N/A N/A
ENSMUST00000172357 N/A 0.357±0.13 N/A N/A 0.071±0.00 0.057±0.02 0.118±0.01 0.064±0.01 N/A 0.029±0.01 N/A 0.122±0.00 0.012±0.00 N/A

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