C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heparan sulfate (glucosamine) 3-O-sulfotransferase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058738 Hs3st5-001 ENSMUSG00000044499 10090 + 10:36506819-36834389 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartOvaryENSMUST00000058738
Transcript ID Adipose Bladder Brain Breast Colon Heart Ovary
ENSMUST00000058738 0.030±0.00 0.022±0.00 1.360±0.82 0.117±0.05 0.095±0.00 0.151±0.00 0.089±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008GU CIL_0008GU_0002 VISTA 10:36183581-36786087
CIL_0007P5 CIL_0007P5_000A UCNEbase 10:36379394-37135425

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005794 IEA Golgi apparatus
GO:0006477 IEA protein sulfation
GO:0008467 ISS [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity
GO:0015015 ISS heparan sulfate proteoglycan biosynthetic process, enzymatic modification
GO:0016021 IEA integral component of membrane
GO:0046596 ISS regulation of viral entry into host cell
GO:0050819 IEA negative regulation of coagulation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312719 HS3ST5-001 protein_coding Homo_sapiens 0 1701
ENST00000411826 HS3ST5-201 protein_coding Homo_sapiens 0 1650

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