C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008IV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs777 VISTA 9606 2:144999939-145601077
GeneTranscriptPositionBiotype
ENSG00000214064 (RPL6P5)
ribosomal protein L6 pseudogene 5 		ENST00000445678 (RPL6P5-001) 145337230-145338057 processed_pseudogene
ENSG00000225107 (AC092484.1)
 ENST00000420548 (AC092484.1-001) 145569294-145588024 lincRNA
ENSG00000226674 (TEX41)
testis expressed 41 (non-protein coding) 		ENST00000414195 (TEX41-010) 145023228-145182649 lincRNA
ENST00000414256 (TEX41-006) 144668019-144890214 lincRNA
ENST00000420472 (TEX41-009) 145023187-145172675 lincRNA
ENST00000423031 (TEX41-007) 145023095-145072654 lincRNA
ENST00000431734 (TEX41-005) 144667986-144811275 lincRNA
ENST00000432608 (TEX41-003) 144667967-144768383 lincRNA
ENST00000445791 (TEX41-002) 144667985-145076729 lincRNA
ENST00000451027 (TEX41-004) 144667985-145044443 lincRNA
ENST00000451478 (TEX41-008) 145023158-145182405 lincRNA
ENST00000451774 (TEX41-001) 144668026-145074095 lincRNA
ENST00000594471 (TEX41-021) 144667985-145182374 lincRNA
ENST00000594626 (TEX41-036) 144766361-145182374 lincRNA
ENST00000594837 (TEX41-017) 145023232-145058210 lincRNA
ENST00000595686 (TEX41-033) 144667990-145182374 lincRNA
ENST00000596034 (TEX41-020) 145023228-145182641 lincRNA
ENST00000596230 (TEX41-022) 144667985-145182344 lincRNA
ENST00000596278 (TEX41-019) 145023228-145073146 lincRNA
ENST00000596540 (TEX41-030) 144667985-145172085 lincRNA
ENST00000596589 (TEX41-027) 144668087-145182374 lincRNA
ENST00000596747 (TEX41-015) 145023228-145152141 lincRNA
ENST00000596970 (TEX41-013) 145023228-145182473 lincRNA
ENST00000597173 (TEX41-011) 145023172-145152502 lincRNA
ENST00000597469 (TEX41-034) 144667985-145182374 lincRNA
ENST00000597655 (TEX41-031) 144667967-145172078 lincRNA
ENST00000597670 (TEX41-037) 144668012-145182374 lincRNA
ENST00000597893 (TEX41-028) 144668087-145182374 lincRNA
ENST00000598248 (TEX41-025) 144667985-145182374 lincRNA
ENST00000598659 (TEX41-029) 144667967-145182374 lincRNA
ENST00000599072 (TEX41-023) 144668057-145182374 lincRNA
ENST00000599187 (TEX41-035) 144668020-145182374 lincRNA
ENST00000599358 (TEX41-018) 145023228-145043945 lincRNA
ENST00000600064 (TEX41-032) 144668012-145182374 lincRNA
ENST00000600679 (TEX41-024) 144667978-145182374 lincRNA
ENST00000601277 (TEX41-026) 144667978-145182374 lincRNA
ENST00000601578 (TEX41-016) 145023228-145182617 lincRNA
ENST00000602041 (TEX41-014) 145023228-145182564 lincRNA
ENST00000602108 (TEX41-012) 145023172-145182641 lincRNA
ENST00000604253 (TEX41-038) 145171998-145182509 lincRNA
ENST00000605238 (TEX41-039) 145171998-145182515 lincRNA
ENST00000608432 (TEX41-040) 145023228-145182463 lincRNA
ENST00000608652 (TEX41-042) 145023228-145182374 lincRNA
ENST00000609705 (TEX41-041) 145023228-145182424 lincRNA
ENST00000614173 (TEX41-043) 144896566-144903783 lincRNA
ENSG00000235435 (AC064865.1)
 ENST00000454965 (AC064865.1-001) 145294277-145331847 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
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Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_0008IV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs777 VISTA 10090 2:45621900-46223049
GeneTranscriptPositionBiotype
ENSMUSG00000083510 (Gm13478)
predicted gene 13478 		ENSMUST00000118312 (Gm13478-001) 45647191-45647603 processed_pseudogene
ENSMUSG00000083807 (Gm13466)
predicted gene 13466 		ENSMUST00000121515 (Gm13466-001) 45809472-45810470 processed_pseudogene
ENSMUSG00000086202 (1700019E08Rik)
RIKEN cDNA 1700019E08 gene 		ENSMUST00000134308 (1700019E08Rik-002) 45696800-45698067 lincRNA
ENSMUST00000153567 (1700019E08Rik-001) 45696605-45698447 lincRNA
ENSMUSG00000086710 (Gm13465)
predicted gene 13465 		ENSMUST00000129687 (Gm13465-001) 45733457-45753311 lincRNA

Mus musculus Ensembl (GRCm38)

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Genes
Structures from Ensembl
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008IV_0001ENSG00000214064ENST00000445678ENSG00000225107ENST00000420548ENSG00000226674ENST00000414195ENST00000420472ENST00000431734ENST00000445791ENST00000451027ENST00000451478ENST00000451774ENST00000594837ENST00000596034ENST00000596278ENST00000596747ENST00000596970ENST00000597173ENST00000602041ENST00000604253ENST00000608432ENSG00000235435ENST00000454965CIL_0008IV_0002ENSMUSG00000083510ENSMUST00000118312ENSMUSG00000083807ENSMUST00000121515ENSMUSG00000086202ENSMUST00000134308ENSMUST00000153567ENSMUSG00000086710ENSMUST00000129687
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000214064 ENST00000445678 N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225107 ENST00000420548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00
ENSG00000226674 ENST00000414195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.346±0.00 N/A N/A
ENST00000414256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000420472 N/A N/A 2.282±0.00 N/A N/A 0.220±0.00 N/A 0.091±0.00 N/A 0.417±0.00 N/A 0.297±0.00 0.050±0.00 N/A
ENST00000423031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431734 N/A N/A N/A N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000432608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445791 N/A N/A 0.226±0.00 N/A N/A 0.035±0.00 0.007±0.00 N/A 0.013±0.00 0.064±0.00 N/A 0.066±0.00 0.018±0.00 0.406±0.07
ENST00000451027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.112±0.00 3.802±0.00
ENST00000451478 N/A N/A N/A N/A N/A N/A N/A 1.061±0.00 0.329±0.00 0.307±0.00 N/A N/A N/A N/A
ENST00000451774 N/A 0.093±0.00 N/A N/A N/A 0.072±0.00 N/A 0.062±0.00 0.015±0.00 0.037±0.00 0.056±0.00 N/A 0.018±0.00 0.669±0.20
ENST00000594471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000594837 N/A N/A N/A N/A N/A N/A 0.034±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000595686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596034 0.097±0.00 N/A N/A N/A 0.267±0.00 N/A N/A 0.279±0.00 N/A N/A 0.349±0.00 N/A N/A 1.820±0.00
ENST00000596230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.886±0.00
ENST00000596540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596747 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.390±0.00 N/A 0.141±0.11 N/A N/A
ENST00000596970 N/A N/A N/A N/A N/A N/A N/A 0.325±0.00 N/A N/A 0.179±0.00 N/A N/A N/A
ENST00000597173 0.121±0.00 0.295±0.00 N/A 0.134±0.00 N/A 0.166±0.00 0.057±0.00 0.307±0.00 0.036±0.00 N/A N/A 0.369±0.19 N/A N/A
ENST00000597469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602041 N/A 0.398±0.00 N/A 0.240±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000604253 N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000605238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608432 0.208±0.00 N/A N/A N/A N/A N/A N/A N/A 0.062±0.00 N/A N/A 0.121±0.00 N/A N/A
ENST00000608652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000235435 ENST00000454965 N/A N/A 1.123±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000083510 ENSMUST00000118312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.149±0.00
ENSMUSG00000083807 ENSMUST00000121515 N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086202 ENSMUST00000134308 0.128±0.00 N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.202±0.00 0.430±0.19
ENSMUST00000153567 N/A N/A 0.015±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.241±0.14
ENSMUSG00000086710 ENSMUST00000129687 0.079±0.00 0.214±0.00 N/A 0.008±0.00 N/A 0.162±0.01 0.082±0.02 0.189±0.10 0.153±0.08 0.078±0.00 N/A 0.566±0.36 0.063±0.02 0.217±0.17

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