C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 13466
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121515 Gm13466-001 ENSMUSG00000083807 10090 + 2:45809472-45810470 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENSMUST00000121515
Transcript ID Breast
ENSMUST00000121515 0.039±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L9 CIL_0007L9_0005 UCNEbase 2:43782078-47834434
CIL_0007GY CIL_0007GY_0002 CGP 2:44983634-48903269
CIL_000909 CIL_000909_0002 VISTA 2:45536162-46137257
CIL_0008IV CIL_0008IV_0002 VISTA 2:45621900-46223049

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 200
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 837
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 649
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 839
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 837
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 837
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 0 331
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 592
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 760
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 424
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 556
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 455
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 649
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 649
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 606
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 634
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 346
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 756

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