C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008RB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs662 VISTA 9606 2:156564116-157165074
GeneTranscriptPositionBiotype
ENSG00000115159 (GPD2)
glycerol-3-phosphate dehydrogenase 2 (mitochondrial) 		ENST00000310454 (GPD2-001) 156435441-156586403 protein_coding
ENST00000409125 (GPD2-201) 156473572-156583228 protein_coding
ENST00000409674 (GPD2-003) 156473572-156583058 protein_coding
ENST00000409861 (GPD2-012) 156473572-156613735 nonsense_mediated_decay
ENST00000415049 (GPD2-008) 156435290-156510849 protein_coding
ENST00000416888 (GPD2-005) 156473572-156501844 nonsense_mediated_decay
ENST00000430992 (GPD2-006) 156473592-156510834 nonsense_mediated_decay
ENST00000438166 (GPD2-002) 156436389-156583058 protein_coding
ENST00000464846 (GPD2-011) 156571172-156583009 retained_intron
ENST00000492005 (GPD2-009) 156579083-156583048 processed_transcript
ENST00000495851 (GPD2-007) 156436427-156501881 processed_transcript
ENST00000496190 (GPD2-010) 156579686-156583273 processed_transcript
ENST00000540309 (GPD2-202) 156436485-156583404 protein_coding
ENSG00000238069 (RPLP0P7)
ribosomal protein, large, P0 pseudogene 7 		ENST00000416050 (RPLP0P7-001) 156777706-156778372 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0008RB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs662 VISTA 10090 2:57371881-57972832
GeneTranscriptPositionBiotype
ENSMUSG00000081642 (Gm13532)
predicted gene 13532 		ENSMUST00000120373 (Gm13532-001) 57628989-57629228 processed_pseudogene
ENSMUSG00000084338 (Gm13531)
predicted gene 13531 		ENSMUST00000121893 (Gm13531-001) 57425167-57425709 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008RB_0001ENSG00000115159ENST00000310454ENST00000409125ENST00000409674ENST00000409861ENST00000415049ENST00000416888ENST00000430992ENST00000438166ENST00000464846ENST00000492005ENST00000495851ENST00000496190ENST00000540309ENSG00000238069ENST00000416050CIL_0008RB_0002ENSMUSG00000081642ENSMUST00000120373ENSMUSG00000084338ENSMUST00000121893
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008RB_0001ENSG00000115159ENST00000310454ENST00000409674ENST00000438166ENST00000464846ENST00000496190ENSG00000238069ENST00000416050CIL_0008RB_0002ENSMUSG00000081642ENSMUST00000120373ENSMUSG00000084338ENSMUST00000121893
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115159 ENST00000310454 N/A N/A 0.693±0.00 1.629±0.14 1.354±0.00 N/A 1.588±0.00 1.991±1.65 N/A N/A 6.649±0.00 5.603±1.01 0.407±0.07 N/A
ENST00000409125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409674 N/A N/A N/A N/A 1.729±0.00 N/A N/A 0.355±0.00 N/A N/A 1.731±0.00 N/A N/A 3.031±0.00
ENST00000409861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000415049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438166 N/A N/A N/A N/A 2.358±0.00 2.573±0.00 N/A N/A 1.929±0.00 N/A N/A N/A 1.089±0.00 N/A
ENST00000464846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.076±0.00 5.817±0.00
ENST00000492005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496190 N/A N/A N/A N/A N/A N/A N/A 1.167±0.00 N/A N/A N/A N/A N/A N/A
ENST00000540309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000238069 ENST00000416050 N/A 0.021±0.00 N/A N/A N/A N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000081642 ENSMUST00000120373 1.137±0.00 N/A 0.205±0.09 0.421±0.34 N/A N/A N/A N/A 1.034±0.47 N/A 0.323±0.00 0.228±0.00 0.511±0.22 N/A
ENSMUSG00000084338 ENSMUST00000121893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.011±0.00 N/A

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