C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008RL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs96 VISTA 9606 16:17351247-17952556
GeneTranscriptPositionBiotype
ENSG00000103489 (XYLT1)
xylosyltransferase I 		ENST00000261381 (XYLT1-001) 17101769-17470881 protein_coding
ENST00000563403 (XYLT1-002) 17355228-17369725 processed_transcript
ENST00000568226 (XYLT1-003) 17354672-17403501 processed_transcript
ENST00000575674 (XYLT1-004) 17198031-17259028 retained_intron
ENSG00000228071 (RPL7P47)
ribosomal protein L7 pseudogene 47 		ENST00000497299 (RPL7P47-001) 17932720-17933275 processed_pseudogene
ENSG00000259929 (CTA-481E9.4)
 ENST00000567304 (CTA-481E9.4-002) 17967393-18151595 lincRNA
ENST00000569048 (CTA-481E9.4-001) 17933189-17972542 lincRNA
ENSG00000260945 (RP11-916L7.1)
 ENST00000568026 (RP11-916L7.1-001) 17540331-17540985 lincRNA
ENSG00000261555 (CTD-3229J4.1)
 ENST00000564852 (CTD-3229J4.1-001) 17825252-17826906 lincRNA
ENSG00000275927 (RP11-567P19.1)
 ENST00000618290 (RP11-567P19.1-001) 17445825-17446380 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0008RL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs96 VISTA 10090 7:116942693-117544007
GeneTranscriptPositionBiotype
ENSMUSG00000030657 (Xylt1)
xylosyltransferase 1 		ENSMUST00000032892 (Xylt1-001) 117380979-117667751 protein_coding
ENSMUST00000160035 (Xylt1-002) 117380979-117635185 retained_intron
ENSMUST00000161889 (Xylt1-003) 117475492-117549359 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008RL_0001ENSG00000103489ENST00000261381ENST00000563403ENST00000568226ENST00000575674ENSG00000228071ENST00000497299ENSG00000259929ENST00000567304ENST00000569048ENSG00000260945ENST00000568026ENSG00000261555ENST00000564852ENSG00000275927ENST00000618290CIL_0008RL_0002ENSMUSG00000030657ENSMUST00000032892ENSMUST00000160035ENSMUST00000161889
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008RL_0001ENSG00000103489ENST00000261381ENST00000568226ENSG00000228071ENST00000497299ENSG00000259929ENST00000567304ENST00000569048ENSG00000260945ENST00000568026ENSG00000261555ENST00000564852ENSG00000275927ENST00000618290CIL_0008RL_0002ENSMUSG00000030657ENSMUST00000032892ENSMUST00000160035ENSMUST00000161889
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000103489 ENST00000261381 3.826±0.00 1.849±0.00 0.146±0.00 1.462±0.79 1.996±0.00 3.130±0.00 0.342±0.20 0.719±0.54 0.968±0.80 1.674±0.00 0.611±0.00 1.536±1.51 2.062±1.33 N/A
ENST00000563403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568226 N/A N/A N/A N/A N/A N/A 0.263±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000575674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228071 ENST00000497299 0.291±0.00 0.302±0.00 N/A 0.127±0.00 0.274±0.15 0.817±0.00 0.089±0.00 0.178±0.00 0.091±0.05 0.208±0.00 0.389±0.00 0.599±0.72 0.582±0.69 0.271±0.02
ENSG00000259929 ENST00000567304 0.085±0.00 0.129±0.00 N/A 0.152±0.00 0.271±0.00 N/A 0.219±0.00 0.147±0.00 0.094±0.00 N/A N/A N/A N/A 0.265±0.15
ENST00000569048 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.126±0.00 N/A N/A N/A N/A
ENSG00000260945 ENST00000568026 0.110±0.00 0.443±0.00 N/A 0.215±0.00 0.394±0.00 0.051±0.00 0.078±0.00 0.358±0.00 0.192±0.00 0.268±0.00 N/A 0.043±0.00 N/A 0.181±0.00
ENSG00000261555 ENST00000564852 N/A N/A N/A 0.023±0.00 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 0.018±0.00
ENSG00000275927 ENST00000618290 N/A 0.246±0.00 N/A 0.141±0.00 0.812±0.72 N/A N/A N/A N/A 0.041±0.00 N/A 0.115±0.01 0.115±0.00 0.152±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030657 ENSMUST00000032892 0.474±0.07 1.835±0.46 N/A N/A 2.224±1.15 2.577±1.15 0.456±0.12 1.721±0.79 0.054±0.02 1.096±0.42 0.693±0.22 2.615±0.73 N/A 0.488±0.23
ENSMUST00000160035 N/A N/A N/A 4.554±0.00 N/A N/A 0.124±0.01 N/A 0.046±0.02 N/A N/A 0.722±0.26 2.336±0.00 0.073±0.00
ENSMUST00000161889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.393±0.00 0.352±0.00

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