C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BMP-binding endothelial regulator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000071982 Bmper-201 ENSMUSG00000031963 10090 + 9:23223076-23485202 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071982
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071982 2.541±0.53 0.517±0.26 0.470±0.15 2.312±0.63 3.848±0.84 0.476±0.11 0.688±0.36 0.166±0.03 0.235±0.12 6.481±0.73 1.020±0.35 2.303±0.64 3.718±4.71 0.176±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FH CIL_0003FH_0002 CGP 9:22475715-23485202
CIL_0008UM CIL_0008UM_0002 VISTA 9:23077927-23679852
CIL_0003FG CIL_0003FG_0002 CGP 9:23223076-24316398

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001657 IEP ureteric bud development
GO:0002043 IEA blood vessel endothelial cell proliferation involved in sprouting angiogenesis
GO:0005515 IPI protein binding
GO:0005576 IDA extracellular region
GO:0005615 IEA extracellular space
GO:0010594 IEA regulation of endothelial cell migration
GO:0030514 IDA negative regulation of BMP signaling pathway
GO:0042118 IEA endothelial cell activation
GO:0048839 IDA inner ear development
GO:0060393 IEA regulation of pathway-restricted SMAD protein phosphorylation
GO:0070374 IEA positive regulation of ERK1 and ERK2 cascade

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297161 BMPER-001 protein_coding Homo_sapiens 0 2892
ENST00000436222 BMPER-004 protein_coding Homo_sapiens 0 420
ENST00000444773 BMPER-003 nonsense_mediated_decay Homo_sapiens 0 529
ENST00000448280 BMPER-007 nonsense_mediated_decay Homo_sapiens 0 466
ENST00000476525 BMPER-006 processed_transcript Homo_sapiens 0 616
ENST00000494786 BMPER-005 processed_transcript Homo_sapiens 0 326
ENST00000496609 BMPER-002 retained_intron Homo_sapiens 0 564

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