C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0008XV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs974 VISTA 9606 9:80497785-81099057
GeneTranscriptPositionBiotype
ENSG00000225901 (MTND2P9)
MT-ND2 pseudogene 9
ENST00000422293 (MTND2P9-001) 80565032-80565962 unprocessed_pseudogene
ENSG00000226798 (RP11-289F5.1)
ENST00000397864 (RP11-289F5.1-001) 80869758-80871295 lincRNA
ENSG00000232981 (RP11-117O7.2)
ENST00000427672 (RP11-117O7.2-001) 80563571-80564630 unprocessed_pseudogene
CIL_0008XV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs974 VISTA 10090 4:70830904-71432135
GeneTranscriptPositionBiotype
ENSMUSG00000083549 (Gm11227)
predicted gene 11227
ENSMUST00000119774 (Gm11227-001) 71072673-71073143 processed_pseudogene
ENSMUSG00000083914 (Rps18-ps1)
ribosomal protein S18, pseudogene 1
ENSMUST00000120838 (Rps18-ps1-001) 71370738-71371196 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008XV_0001ENSG00000225901ENST00000422293ENSG00000226798ENST00000397864ENSG00000232981ENST00000427672CIL_0008XV_0002ENSMUSG00000083549ENSMUST00000119774ENSMUSG00000083914ENSMUST00000120838
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008XV_0001ENSG00000225901ENST00000422293ENSG00000226798ENST00000397864ENSG00000232981ENST00000427672CIL_0008XV_0002ENSMUSG00000083549ENSMUST00000119774ENSMUSG00000083914ENSMUST00000120838
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000225901 ENST00000422293 0.077±0.00 0.082±0.00 0.423±0.00 0.032±0.00 0.048±0.00 0.057±0.00 0.097±0.09 0.169±0.00 0.016±0.00 N/A 0.079±0.00 0.010±0.00 N/A 0.198±0.16
ENSG00000226798 ENST00000397864 N/A 0.308±0.00 N/A 0.094±0.00 0.128±0.00 0.109±0.00 N/A 0.113±0.04 0.033±0.00 0.109±0.00 0.011±0.00 0.015±0.00 N/A 0.055±0.02
ENSG00000232981 ENST00000427672 0.014±0.00 0.212±0.00 0.441±0.00 N/A N/A N/A 0.013±0.00 0.053±0.00 N/A N/A N/A N/A N/A 0.128±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000083549 ENSMUST00000119774 0.195±0.00 N/A N/A N/A N/A 0.244±0.00 0.269±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083914 ENSMUST00000120838 0.736±0.19 N/A 0.288±0.02 0.083±0.03 0.202±0.07 N/A 0.096±0.00 0.133±0.06 0.324±0.11 0.220±0.00 0.154±0.01 0.538±0.29 0.562±0.41 0.172±0.08

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