C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008Y9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm985 VISTA 9606 13:106048447-106651741
GeneTranscriptPositionBiotype
ENSG00000125266 (EFNB2)
ephrin-B2 		ENST00000245323 (EFNB2-001) 106489731-106535114 protein_coding
ENSG00000134884 (ARGLU1)
arginine and glutamate rich 1 		ENST00000360629 (ARGLU1-003) 106557106-106567623 protein_coding
ENST00000375926 (ARGLU1-002) 106543828-106561951 protein_coding
ENST00000400198 (ARGLU1-001) 106541673-106568164 protein_coding
ENST00000472226 (ARGLU1-004) 106543473-106557695 processed_transcript
ENSG00000174418 (RPL35P9)
ribosomal protein L35 pseudogene 9 		ENST00000446059 (RPL35P9-001) 106425773-106426122 processed_pseudogene
ENSG00000222643 (AL603632.1)
 ENST00000410711 (AL603632.1-201) 106128371-106128488 miRNA
ENSG00000222682 (RNA5SP38)
RNA, 5S ribosomal pseudogene 38 		ENST00000410750 (RNA5SP38-201) 106155372-106155490 rRNA
ENSG00000272274 (LINC00551)
long intergenic non-protein coding RNA 551 		ENST00000607593 (LINC00551-001) 106617810-106631359 lincRNA
ENSG00000274204 (RP11-272L14.2)
 ENST00000614612 (RP11-272L14.2-001) 106506046-106506713 sense_intronic
CIL_0008Y9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm985 VISTA 10090 8:8188054-8791339
GeneTranscriptPositionBiotype
ENSMUSG00000001300 (Efnb2)
ephrin B2 		ENSMUST00000001319 (Efnb2-001) 8617434-8660773 protein_coding
ENSMUST00000152698 (Efnb2-002) 8620597-8639363 protein_coding
ENSMUSG00000040459 (Arglu1)
arginine and glutamate rich 1 		ENSMUST00000048545 (Arglu1-201) 8666577-8690537 protein_coding
ENSMUSG00000040467 (4921522P10Rik)
RIKEN cDNA 4921522P10 gene 		ENSMUST00000048606 (4921522P10Rik-001) 8661801-8664728 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008Y9_0001ENSG00000125266ENST00000245323ENSG00000134884ENST00000360629ENST00000375926ENST00000400198ENST00000472226ENSG00000174418ENST00000446059ENSG00000222643ENST00000410711ENSG00000222682ENST00000410750ENSG00000272274ENST00000607593ENSG00000274204ENST00000614612CIL_0008Y9_0002ENSMUSG00000001300ENSMUST00000001319ENSMUST00000152698ENSMUSG00000040459ENSMUST00000048545ENSMUSG00000040467ENSMUST00000048606
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008Y9_0001ENSG00000125266ENST00000245323ENSG00000134884ENST00000360629ENST00000375926ENST00000400198ENST00000472226ENSG00000174418ENST00000446059ENSG00000222643ENST00000410711ENSG00000222682ENST00000410750ENSG00000272274ENST00000607593ENSG00000274204ENST00000614612CIL_0008Y9_0002ENSMUSG00000001300ENSMUST00000001319ENSMUST00000152698ENSMUSG00000040459ENSMUST00000048545ENSMUSG00000040467ENSMUST00000048606
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125266 ENST00000245323 25.835±0.00 14.651±0.00 N/A 4.543±3.29 7.186±1.07 7.614±4.82 4.659±0.00 3.854±3.21 1.337±0.48 12.017±5.26 1.293±0.75 3.326±2.15 14.297±2.10 5.427±0.71
ENSG00000134884 ENST00000360629 N/A N/A N/A 35.083±0.00 N/A N/A N/A N/A N/A N/A 6.096±0.00 N/A N/A N/A
ENST00000375926 N/A N/A N/A N/A N/A 9.125±0.00 N/A N/A N/A N/A 1.866±0.00 N/A N/A 9.834±0.00
ENST00000400198 1.849±0.00 4.866±0.00 0.561±0.00 5.311±1.70 2.020±0.50 3.123±1.15 1.462±0.12 2.171±0.14 1.229±0.26 N/A 1.381±0.14 7.704±0.00 3.745±0.68 5.897±2.40
ENST00000472226 6.547±0.00 20.983±0.00 3.010±0.00 7.883±3.43 8.429±3.85 5.732±0.00 N/A 10.370±0.00 N/A 12.558±0.91 1.233±0.13 63.563±56.69 30.673±0.00 55.207±48.11
ENSG00000174418 ENST00000446059 N/A N/A N/A N/A 0.086±0.00 0.392±0.00 N/A 0.086±0.00 N/A N/A N/A N/A N/A 0.144±0.00
ENSG00000222643 ENST00000410711 N/A N/A N/A N/A N/A 0.343±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000222682 ENST00000410750 N/A N/A N/A N/A N/A 0.925±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000272274 ENST00000607593 0.052±0.00 0.007±0.00 N/A N/A N/A N/A N/A 0.547±0.00 0.013±0.00 2.288±2.08 N/A 0.037±0.02 0.165±0.00 0.073±0.02
ENSG00000274204 ENST00000614612 0.477±0.00 0.099±0.00 0.607±0.00 0.051±0.00 0.057±0.04 N/A 0.036±0.02 N/A N/A 1.011±0.00 0.029±0.00 0.191±0.20 0.069±0.01 0.292±0.17
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001300 ENSMUST00000001319 5.974±1.60 3.326±0.59 7.090±0.49 13.739±7.69 2.794±0.39 13.751±1.75 1.610±0.28 2.622±1.23 0.373±0.26 31.029±17.67 1.552±0.40 6.989±2.49 7.076±3.78 0.895±0.24
ENSMUST00000152698 11.618±0.00 N/A N/A N/A 3.489±1.26 N/A 5.541±0.88 9.111±2.97 0.797±0.15 N/A N/A 28.984±0.00 N/A N/A
ENSMUSG00000040459 ENSMUST00000048545 N/A 31.202±10.27 33.549±2.55 42.829±16.96 31.298±0.00 12.625±3.77 7.041±0.03 4.195±0.83 12.391±6.90 N/A 16.632±1.55 29.215±15.99 26.039±19.17 9.919±2.14
ENSMUSG00000040467 ENSMUST00000048606 0.050±0.03 0.064±0.00 0.113±0.00 0.020±0.00 0.022±0.00 0.049±0.00 0.059±0.03 0.065±0.05 0.054±0.01 0.107±0.03 0.024±0.01 0.059±0.04 0.016±0.00 5.242±0.96

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