C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00097O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs911 VISTA 9606 20:52635926-53237538
GeneTranscriptPositionBiotype
ENSG00000182463 (TSHZ2)
teashirt zinc finger homeobox 2 		ENST00000329613 (TSHZ2-201) 53185646-53256560 protein_coding
ENST00000371497 (TSHZ2-001) 52972407-53495330 protein_coding
ENST00000603338 (TSHZ2-002) 53185283-53487479 protein_coding
ENST00000605656 (TSHZ2-003) 53255979-53491063 nonsense_mediated_decay
ENSG00000199218 (RN7SKP184)
RNA, 7SK small nuclear pseudogene 184 		ENST00000362348 (RN7SKP184-201) 53097652-53097984 misc_RNA
ENSG00000223492 (RP11-15M15.1)
 ENST00000432706 (RP11-15M15.1-001) 53168643-53179550 antisense
ENSG00000227705 (RP11-15M15.2)
 ENST00000435057 (RP11-15M15.2-001) 53196229-53208705 antisense
ENSG00000232286 (RP11-80K6.2)
 ENST00000426963 (RP11-80K6.2-001) 52858338-52862855 lincRNA
ENSG00000232294 (RP4-715N11.2)
 ENST00000413070 (RP4-715N11.2-002) 52674411-52681578 lincRNA
ENST00000421642 (RP4-715N11.2-005) 52671917-52690608 lincRNA
ENST00000422666 (RP4-715N11.2-001) 52685122-52690929 lincRNA
ENST00000425279 (RP4-715N11.2-004) 52681428-52690580 lincRNA
ENST00000437987 (RP4-715N11.2-006) 52681428-52690580 lincRNA
ENST00000448013 (RP4-715N11.2-003) 52681428-52690580 lincRNA
ENSG00000234948 (LINC01524)
long intergenic non-protein coding RNA 1524 		ENST00000428009 (LINC01524-002) 52620838-52650431 lincRNA
ENST00000454600 (LINC01524-001) 52210645-52646741 lincRNA
CIL_00097O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs911 VISTA 10090 2:169299744-169901398
GeneTranscriptPositionBiotype
ENSMUSG00000085350 (4930529I22Rik)
RIKEN cDNA 4930529I22 gene 		ENSMUST00000131509 (4930529I22Rik-001) 169399145-169405450 lincRNA
ENSMUSG00000086840 (Gm14250)
predicted gene 14250 		ENSMUST00000148458 (Gm14250-001) 169389081-169395524 lincRNA
ENSMUSG00000087074 (Gm14249)
predicted gene 14249 		ENSMUST00000156239 (Gm14249-001) 169480617-169504843 lincRNA
ENSMUSG00000096972 (Gm26883)
predicted gene, 26883 		ENSMUST00000180945 (Gm26883-201) 169633676-169888503 lincRNA
ENSMUST00000181446 (Gm26883-202) 169633646-169888503 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00097O_0001ENSG00000182463ENST00000329613ENST00000371497ENST00000603338ENST00000605656ENSG00000199218ENST00000362348ENSG00000223492ENST00000432706ENSG00000227705ENST00000435057ENSG00000232286ENST00000426963ENSG00000232294ENST00000413070ENST00000421642ENST00000422666ENST00000425279ENST00000437987ENST00000448013ENSG00000234948ENST00000428009ENST00000454600CIL_00097O_0002ENSMUSG00000085350ENSMUST00000131509ENSMUSG00000086840ENSMUST00000148458ENSMUSG00000087074ENSMUST00000156239ENSMUSG00000096972ENSMUST00000180945ENSMUST00000181446
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00097O_0001ENSG00000182463ENST00000329613ENST00000371497ENSG00000199218ENST00000362348ENSG00000223492ENST00000432706ENSG00000227705ENST00000435057ENSG00000232286ENST00000426963ENSG00000232294ENST00000413070ENST00000421642ENST00000422666ENST00000425279ENST00000448013ENSG00000234948ENST00000428009ENST00000454600CIL_00097O_0002ENSMUSG00000085350ENSMUST00000131509ENSMUSG00000086840ENSMUST00000148458ENSMUSG00000087074ENSMUST00000156239ENSMUSG00000096972ENSMUST00000180945ENSMUST00000181446
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000182463 ENST00000329613 N/A N/A N/A N/A N/A N/A N/A 0.525±0.00 1.649±0.00 N/A 0.093±0.00 N/A 0.192±0.12 N/A
ENST00000371497 3.518±0.00 2.075±0.00 0.220±0.00 1.034±0.36 2.466±1.57 2.009±1.57 0.362±0.27 0.549±0.00 0.871±0.19 0.443±0.16 0.582±0.00 2.059±1.27 0.211±0.16 4.208±2.33
ENST00000603338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000199218 ENST00000362348 0.054±0.00 0.056±0.00 N/A 0.323±0.00 0.711±0.65 0.195±0.00 N/A 2.723±0.00 0.707±0.66 1.178±0.00 N/A 2.259±0.00 N/A 0.195±0.00
ENSG00000223492 ENST00000432706 0.067±0.00 0.033±0.00 N/A 0.020±0.00 0.209±0.18 0.517±0.00 N/A N/A 0.050±0.00 0.548±0.00 N/A 0.244±0.22 N/A 0.218±0.10
ENSG00000227705 ENST00000435057 0.029±0.00 N/A N/A N/A 0.472±0.00 0.142±0.00 N/A N/A N/A N/A N/A 0.080±0.00 N/A 0.044±0.02
ENSG00000232286 ENST00000426963 N/A N/A N/A N/A N/A N/A N/A 0.086±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000232294 ENST00000413070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.735±0.26
ENST00000421642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.769±0.00
ENST00000422666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.075±0.00
ENST00000425279 0.056±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.285±0.00
ENSG00000234948 ENST00000428009 0.021±0.00 0.003±0.00 N/A 0.013±0.00 N/A N/A N/A N/A N/A 0.079±0.00 N/A N/A 0.011±0.00 0.076±0.04
ENST00000454600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.053±0.02 1.234±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000085350 ENSMUST00000131509 N/A N/A N/A 0.052±0.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.415±2.52
ENSMUSG00000086840 ENSMUST00000148458 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.776±0.72
ENSMUSG00000087074 ENSMUST00000156239 N/A N/A 0.039±0.00 0.069±0.03 N/A N/A N/A 0.039±0.00 N/A N/A N/A 0.140±0.07 N/A 0.437±0.54
ENSMUSG00000096972 ENSMUST00000180945 N/A N/A N/A N/A 1.602±0.00 N/A N/A N/A N/A N/A 0.822±0.32 N/A 0.315±0.15 N/A
ENSMUST00000181446 22.888±2.46 15.296±1.67 21.256±0.43 8.091±3.23 10.633±3.64 11.181±1.47 3.496±0.64 9.536±0.96 1.802±0.42 5.289±1.50 1.580±0.46 26.846±8.20 1.148±0.53 1.923±1.08

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