Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	teashirt zinc finger homeobox 2
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000182463	TSHZ2	9606	+	20:52972407-53495330	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000329613		TSHZ2-201	53185646-53256560	protein_coding
	ENST00000371497		TSHZ2-001	52972407-53495330	protein_coding
	ENST00000603338		TSHZ2-002	53185283-53487479	protein_coding
	ENST00000605656		TSHZ2-003	53255979-53491063	nonsense_mediated_decay

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000329613	N/A	N/A	N/A	N/A	N/A	N/A	N/A	0.525±0.00	1.649±0.00	N/A	0.093±0.00	N/A	0.192±0.12	N/A
ENST00000371497	3.518±0.00	2.075±0.00	0.220±0.00	1.034±0.36	2.466±1.57	2.009±1.57	0.362±0.27	0.549±0.00	0.871±0.19	0.443±0.16	0.582±0.00	2.059±1.27	0.211±0.16	4.208±2.33

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0007L0	CIL_0007L0_0001	UCNEbase	20:52364212-53392560
CIL_00097O	CIL_00097O_0001	VISTA	20:52635926-53237538
CIL_000904	CIL_000904_0001	VISTA	20:52820055-53421198
CIL_0001GY	CIL_0001GY_0001	CGP	20:52972407-53609907

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003677	IEA	DNA binding
GO:0005515	IEA	protein binding
GO:0005634	IEA	nucleus
GO:0006351	IEA	transcription, DNA-templated
GO:0006355	IEA	regulation of transcription, DNA-templated
GO:0007275	IEA	multicellular organismal development
GO:0010468	IEA	regulation of gene expression
GO:0046872	IEA	metal ion binding

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000079201	TSHZ2	teashirt zinc finger homeobox 2	protein_coding	Danio_rerio
ENSMUSG00000047907	Tshz2	teashirt zinc finger family member 2	protein_coding	Mus_musculus

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