C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: teashirt zinc finger homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371497 TSHZ2-001 ENSG00000182463 9606 + 20:52972407-53495330 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000371497
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000371497 3.518±0.00 2.075±0.00 0.220±0.00 1.034±0.36 2.466±1.57 2.009±1.57 0.362±0.27 0.549±0.00 0.871±0.19 0.443±0.16 0.582±0.00 2.059±1.27 0.211±0.16 4.208±2.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L0 CIL_0007L0_0001 UCNEbase 20:52364212-53392560
CIL_00097O CIL_00097O_0001 VISTA 20:52635926-53237538
CIL_000904 CIL_000904_0001 VISTA 20:52820055-53421198
CIL_0001GY CIL_0001GY_0001 CGP 20:52972407-53609907

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0010468 IEA regulation of gene expression
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109159 Tshz2-001 protein_coding Mus_musculus 0 3718
ENSMUST00000109157 Tshz2-002 protein_coding Mus_musculus 0 3384
ENSMUST00000123300 Tshz2-003 protein_coding Mus_musculus 0 1901
ENSMUST00000185239 Tshz2-005 protein_coding Mus_musculus 0 1622
ENSMUST00000140699 Tshz2-004 protein_coding Mus_musculus 0 817
ENSDART00000109493 TSHZ2-201 protein_coding Danio_rerio 0 291

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