C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00098S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2006 VISTA 9606 3:72018994-72621079
GeneTranscriptPositionBiotype
ENSG00000163602 (RYBP)
RING1 and YY1 binding protein 		ENST00000477973 (RYBP-001) 72371825-72446918 protein_coding
ENSG00000212070 (AC112219.1)
 ENST00000390781 (AC112219.1-201) 72262322-72262428 miRNA
ENSG00000241163 (LINC00877)
long intergenic non-protein coding RNA 877 		ENST00000462492 (LINC00877-006) 72092429-72100869 lincRNA
ENST00000464271 (LINC00877-005) 72060933-72100455 lincRNA
ENST00000468646 (LINC00877-001) 72035300-72100427 lincRNA
ENST00000469218 (LINC00877-007) 72060797-72234244 lincRNA
ENST00000470712 (LINC00877-003) 72059822-72100112 lincRNA
ENST00000481148 (LINC00877-008) 72060841-72242565 lincRNA
ENST00000488545 (LINC00877-004) 72097728-72100957 lincRNA
ENST00000498432 (LINC00877-002) 72060764-72100303 lincRNA
ENST00000608654 (LINC00877-009) 72061061-72101074 lincRNA
ENSG00000242609 (RP11-398A8.1)
 ENST00000467189 (RP11-398A8.1-001) 72086888-72087725 processed_pseudogene
ENSG00000242618 (RP11-433A10.2)
 ENST00000491567 (RP11-433A10.2-001) 72202944-72209892 lincRNA
ENSG00000243083 (LINC00870)
long intergenic non-protein coding RNA 870 		ENST00000469178 (LINC00870-003) 72152759-72172099 lincRNA
ENST00000473713 (LINC00870-001) 72151257-72174332 lincRNA
ENST00000485404 (LINC00870-002) 72152893-72172250 lincRNA
ENSG00000244345 (RP11-654C22.2)
 ENST00000478745 (RP11-654C22.2-001) 72504806-72550552 lincRNA
ENSG00000260670 (RP11-447M4.1)
 ENST00000570082 (RP11-447M4.1-001) 72321051-72324027 lincRNA
ENSG00000272774 (RP11-433A10.3)
 ENST00000608390 (RP11-433A10.3-001) 72178279-72178810 lincRNA
ENSG00000276471 (RP11-398A8.5)
 ENST00000618391 (RP11-398A8.5-001) 72080564-72084641 lincRNA
CIL_00098S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2006 VISTA 10090 6:99896170-100499416
GeneTranscriptPositionBiotype
ENSMUSG00000072872 (Rybp)
RING1 and YY1 binding protein 		ENSMUST00000101118 (Rybp-201) 100228566-100287441 protein_coding
ENSMUSG00000087929 (Gm23234)
predicted gene, 23234 		ENSMUST00000157304 (Gm23234-201) 100494681-100494814 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00098S_0001ENSG00000163602ENST00000477973ENSG00000212070ENST00000390781ENSG00000241163ENST00000462492ENST00000464271ENST00000468646ENST00000469218ENST00000470712ENST00000481148ENST00000488545ENST00000498432ENST00000608654ENSG00000242609ENST00000467189ENSG00000242618ENST00000491567ENSG00000243083ENST00000469178ENST00000473713ENST00000485404ENSG00000244345ENST00000478745ENSG00000260670ENST00000570082ENSG00000272774ENST00000608390ENSG00000276471ENST00000618391CIL_00098S_0002ENSMUSG00000072872ENSMUST00000101118ENSMUSG00000087929ENSMUST00000157304
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00098S_0001ENSG00000163602ENST00000477973ENSG00000212070ENST00000390781ENSG00000241163ENST00000462492ENST00000468646ENST00000470712ENST00000481148ENST00000488545ENST00000608654ENSG00000242609ENST00000467189ENSG00000242618ENST00000491567ENSG00000243083ENST00000469178ENST00000473713ENST00000485404ENSG00000244345ENST00000478745ENSG00000260670ENST00000570082ENSG00000272774ENST00000608390ENSG00000276471ENST00000618391CIL_00098S_0002ENSMUSG00000072872ENSMUST00000101118ENSMUSG00000087929ENSMUST00000157304
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163602 ENST00000477973 4.892±0.00 3.864±0.00 1.098±0.00 3.299±2.51 3.572±0.00 4.114±3.29 1.619±1.19 2.946±1.96 2.441±0.57 7.097±4.20 0.941±0.73 4.588±3.15 6.781±1.79 7.603±1.37
ENSG00000212070 ENST00000390781 N/A N/A N/A N/A 0.726±0.00 N/A N/A N/A N/A N/A 1.017±0.00 N/A N/A N/A
ENSG00000241163 ENST00000462492 N/A N/A N/A N/A N/A N/A N/A N/A 0.241±0.00 N/A N/A N/A N/A N/A
ENST00000464271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468646 N/A 0.132±0.00 N/A 0.094±0.00 N/A 0.035±0.00 0.010±0.00 0.037±0.00 0.089±0.00 N/A N/A 0.090±0.08 0.116±0.05 0.784±0.00
ENST00000469218 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470712 N/A N/A N/A 0.099±0.00 N/A N/A N/A 0.398±0.00 0.096±0.00 N/A N/A N/A N/A N/A
ENST00000481148 0.304±0.00 N/A N/A N/A 0.200±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488545 0.120±0.00 N/A N/A 0.127±0.00 0.114±0.00 0.048±0.00 0.011±0.00 N/A N/A 0.111±0.00 N/A N/A 0.115±0.01 0.220±0.00
ENST00000498432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608654 N/A N/A N/A N/A N/A 0.742±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000242609 ENST00000467189 N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A 0.069±0.00 N/A
ENSG00000242618 ENST00000491567 N/A N/A 0.358±0.00 N/A 0.461±0.00 N/A N/A N/A N/A 0.118±0.00 N/A N/A N/A 0.040±0.00
ENSG00000243083 ENST00000469178 N/A N/A N/A N/A 0.495±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473713 N/A N/A 0.161±0.00 N/A N/A 0.076±0.00 N/A 0.100±0.00 0.259±0.00 N/A N/A 0.088±0.07 0.032±0.00 0.063±0.04
ENST00000485404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.205±0.00
ENSG00000244345 ENST00000478745 N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 0.139±0.00 0.039±0.02
ENSG00000260670 ENST00000570082 0.005±0.00 0.019±0.00 N/A 0.035±0.00 0.005±0.00 0.004±0.00 0.009±0.00 0.005±0.00 0.004±0.00 0.012±0.00 N/A 0.008±0.00 N/A 0.021±0.02
ENSG00000272774 ENST00000608390 N/A N/A N/A 0.139±0.00 N/A N/A N/A N/A 0.272±0.00 0.056±0.00 N/A 0.095±0.00 N/A 0.029±0.00
ENSG00000276471 ENST00000618391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.099±0.00 N/A 0.045±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000072872 ENSMUST00000101118 7.471±4.65 1.632±0.72 13.886±0.83 10.487±6.14 3.272±1.70 5.672±0.51 2.356±0.17 4.878±0.87 4.288±2.28 9.740±2.08 1.094±0.20 9.370±1.79 19.984±9.65 6.118±2.55
ENSMUSG00000087929 ENSMUST00000157304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.953±0.00 N/A

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