C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0009B0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1599 VISTA 9606 8:91758469-92361167
GeneTranscriptPositionBiotype
ENSG00000233778 (RP11-777J24.1)
 ENST00000465478 (RP11-777J24.1-001) 92144088-92144435 processed_pseudogene
ENSG00000253118 (RP11-700E23.3)
 ENST00000522089 (RP11-700E23.3-001) 92351912-92352148 processed_pseudogene
ENSG00000253901 (RP11-122C21.1)
 ENST00000518416 (RP11-122C21.1-002) 91564980-91907453 lincRNA
ENST00000521199 (RP11-122C21.1-001) 91542924-91907619 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0009B0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1599 VISTA 10090 4:13486474-14089660
GeneTranscriptPositionBiotype
ENSMUSG00000006586 (Runx1t1)
runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 		ENSMUST00000006761 (Runx1t1-001) 13743436-13893649 protein_coding
ENSMUST00000098256 (Runx1t1-004) 13784782-13891117 protein_coding
ENSMUST00000098257 (Runx1t1-003) 13771377-13890323 protein_coding
ENSMUST00000105566 (Runx1t1-201) 13751297-13893628 protein_coding
ENSMUST00000139736 (Runx1t1-005) 13889220-13889962 processed_transcript
ENSMUST00000150583 (Runx1t1-002) 13751297-13843027 processed_transcript
ENSMUSG00000081063 (Gm11825)
predicted gene 11825 		ENSMUST00000120710 (Gm11825-001) 13606034-13606769 processed_pseudogene
ENSMUSG00000086927 (Gm11823)
predicted gene 11823 		ENSMUST00000130582 (Gm11823-001) 13919954-13995193 lincRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009B0_0001ENSG00000233778ENST00000465478ENSG00000253118ENST00000522089ENSG00000253901ENST00000518416ENST00000521199CIL_0009B0_0002ENSMUSG00000006586ENSMUST00000006761ENSMUST00000098256ENSMUST00000098257ENSMUST00000105566ENSMUST00000139736ENSMUST00000150583ENSMUSG00000081063ENSMUST00000120710ENSMUSG00000086927ENSMUST00000130582
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009B0_0001ENSG00000233778ENST00000465478ENSG00000253118ENST00000522089ENSG00000253901ENST00000518416ENST00000521199CIL_0009B0_0002ENSMUSG00000006586ENSMUST00000006761ENSMUST00000098256ENSMUST00000098257ENSMUST00000105566ENSMUST00000139736ENSMUST00000150583ENSMUSG00000081063ENSMUST00000120710ENSMUSG00000086927ENSMUST00000130582
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000233778 ENST00000465478 N/A 0.071±0.00 N/A N/A 0.152±0.00 0.563±0.00 0.068±0.00 0.154±0.00 0.955±0.00 0.071±0.00 N/A 1.261±0.87 2.501±0.00 0.305±0.00
ENSG00000253118 ENST00000522089 N/A N/A N/A 0.315±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253901 ENST00000518416 N/A 0.130±0.00 N/A 0.032±0.00 0.092±0.00 N/A N/A 0.089±0.00 0.079±0.00 N/A N/A N/A N/A N/A
ENST00000521199 N/A 0.036±0.00 N/A N/A N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006586 ENSMUST00000006761 1.162±0.73 0.164±0.02 1.513±0.59 10.052±7.27 0.271±0.05 0.450±0.12 0.210±0.07 0.098±0.04 0.899±0.83 0.793±0.30 0.207±0.05 0.495±0.20 0.477±0.36 N/A
ENSMUST00000098256 1.438±0.19 0.179±0.07 N/A 2.984±0.00 0.826±0.42 0.220±0.06 0.409±0.11 0.290±0.06 1.118±0.69 0.649±0.24 N/A 1.362±0.44 0.257±0.04 0.368±0.00
ENSMUST00000098257 0.762±0.47 0.136±0.07 N/A 7.020±0.00 0.656±0.04 0.498±0.21 0.280±0.04 0.223±0.05 0.064±0.02 0.680±0.10 N/A 1.055±0.82 0.348±0.11 2.710±0.63
ENSMUST00000105566 N/A N/A N/A N/A N/A 0.292±0.00 N/A N/A 0.455±0.14 N/A N/A N/A N/A 0.470±0.26
ENSMUST00000139736 N/A 0.888±0.31 N/A N/A 4.591±1.46 2.517±0.90 N/A N/A 0.140±0.00 3.677±0.39 N/A 5.967±1.78 N/A N/A
ENSMUST00000150583 N/A N/A N/A N/A N/A 0.330±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081063 ENSMUST00000120710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A
ENSMUSG00000086927 ENSMUST00000130582 N/A N/A N/A 0.004±0.00 N/A N/A N/A N/A 0.002±0.00 N/A N/A N/A 0.002±0.00 N/A

Loading