C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0009D7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1172 VISTA 9606 5:92998996-93600770
GeneTranscriptPositionBiotype
ENSG00000175745 (NR2F1)
nuclear receptor subfamily 2, group F, member 1 		ENST00000327111 (NR2F1-001) 93583337-93594615 protein_coding
ENST00000502982 (NR2F1-003) 93587460-93588388 processed_transcript
ENST00000506162 (NR2F1-005) 93591973-93594143 processed_transcript
ENST00000512697 (NR2F1-002) 93587101-93588333 processed_transcript
ENST00000615873 (NR2F1-201) 93585024-93594072 protein_coding
ENSG00000213730 (POLD2P1)
polymerase (DNA directed), delta 2, accessory subunit pseudogene 1 		ENST00000511220 (POLD2P1-001) 93267429-93268425 processed_pseudogene
ENSG00000237187 (NR2F1-AS1)
NR2F1 antisense RNA 1 		ENST00000503134 (NR2F1-AS1-002) 93543542-93581032 antisense
ENST00000504474 (NR2F1-AS1-004) 93541872-93581297 antisense
ENST00000507963 (NR2F1-AS1-003) 93553753-93581055 antisense
ENST00000510254 (NR2F1-AS1-005) 93411289-93581007 antisense
ENST00000513055 (NR2F1-AS1-001) 93553761-93585648 antisense
ENST00000606165 (NR2F1-AS1-012) 93411018-93423242 antisense
ENST00000606188 (NR2F1-AS1-015) 93411018-93438737 antisense
ENST00000606233 (NR2F1-AS1-010) 93409809-93581219 antisense
ENST00000606696 (NR2F1-AS1-011) 93541872-93581288 antisense
ENST00000606739 (NR2F1-AS1-009) 93411021-93570819 antisense
ENST00000607112 (NR2F1-AS1-013) 93411402-93422413 antisense
ENST00000607195 (NR2F1-AS1-014) 93411033-93422423 antisense
ENST00000607797 (NR2F1-AS1-008) 93409359-93570793 antisense
ENST00000607831 (NR2F1-AS1-006) 93411447-93571343 antisense
ENSG00000251361 (CTD-2091N23.1)
 ENST00000515153 (CTD-2091N23.1-001) 93019663-93068669 lincRNA
ENSG00000278905 (RP11-65F13.3)
 ENST00000623223 (RP11-65F13.3-001) 93600357-93603598 TEC

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Structures from Ensembl
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CIL_0009D7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1172 VISTA 10090 13:78280584-78882512
GeneTranscriptPositionBiotype
ENSMUSG00000098003 (Gm6317)
predicted gene 6317 		ENSMUST00000183159 (Gm6317-001) 78372987-78379134 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009D7_0001ENSG00000175745ENST00000327111ENST00000502982ENST00000506162ENST00000512697ENST00000615873ENSG00000213730ENST00000511220ENSG00000237187ENST00000503134ENST00000504474ENST00000507963ENST00000510254ENST00000513055ENST00000606165ENST00000606188ENST00000606233ENST00000606696ENST00000606739ENST00000607112ENST00000607195ENST00000607797ENST00000607831ENSG00000251361ENST00000515153ENSG00000278905ENST00000623223CIL_0009D7_0002ENSMUSG00000098003ENSMUST00000183159
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009D7_0001ENSG00000175745ENST00000327111ENST00000615873ENSG00000213730ENST00000511220ENSG00000237187ENST00000503134ENST00000507963ENST00000606188ENST00000606233ENST00000606696ENST00000606739ENST00000607797ENST00000607831ENSG00000251361ENST00000515153ENSG00000278905ENST00000623223CIL_0009D7_0002ENSMUSG00000098003ENSMUST00000183159
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000175745 ENST00000327111 3.579±0.00 14.334±0.00 2.311±0.00 14.802±0.00 2.585±2.01 2.762±2.44 0.115±0.07 7.528±6.97 2.566±0.49 14.395±13.47 0.049±0.00 16.939±19.89 20.675±7.35 6.868±3.22
ENST00000502982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506162 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.105±0.00 20.511±0.00 21.360±4.68 N/A
ENSG00000213730 ENST00000511220 0.062±0.00 N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A 0.019±0.00 0.030±0.00 0.175±0.00 0.041±0.00
ENSG00000237187 ENST00000503134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A
ENST00000504474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507963 N/A N/A N/A N/A N/A N/A N/A N/A 4.141±0.00 N/A N/A N/A N/A N/A
ENST00000510254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606188 N/A N/A N/A N/A 7.852±0.00 6.398±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000606233 N/A N/A N/A 6.016±1.67 N/A N/A N/A N/A N/A N/A 0.026±0.00 0.925±0.00 N/A N/A
ENST00000606696 N/A N/A N/A N/A 1.521±0.00 1.129±0.00 0.148±0.06 N/A 3.706±0.00 2.171±0.00 N/A N/A N/A 2.587±0.00
ENST00000606739 N/A N/A N/A N/A 0.984±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A
ENST00000607831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.223±0.00
ENSG00000251361 ENST00000515153 N/A N/A N/A 0.092±0.00 0.058±0.00 N/A N/A N/A N/A 0.051±0.00 N/A N/A 0.032±0.00 N/A
ENSG00000278905 ENST00000623223 N/A N/A 0.397±0.00 0.088±0.00 N/A N/A N/A N/A 0.028±0.00 N/A N/A 0.036±0.00 0.013±0.00 0.008±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000098003 ENSMUST00000183159 N/A N/A N/A 0.023±0.00 N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A N/A N/A

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