C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T-box 3a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000006380 tbx3a-001 ENSDARG00000002216 7955 + 5:75416715-75424283 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000006380
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000006380 1.268±0.75 0.162±0.05 0.284±0.07 0.023±0.00 0.887±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YZ CIL_0004YZ_0001 CGP 5:75416715-75476894

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0035050 IMP embryonic heart tube development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018748 Tbx3-001 protein_coding Mus_musculus 0 477
ENSMUST00000079719 Tbx3-201 protein_coding Mus_musculus 0 676
ENSMUST00000121021 Tbx3-002 protein_coding Mus_musculus 0 676

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