C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004YZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000002216-ENSDARG00000024894 CGP 7955 5:75416715-75476894
GeneTranscriptPositionBiotype
ENSDARG00000002216 (tbx3a)
T-box 3a 		ENSDART00000006380 (tbx3a-001) 75416715-75424283 protein_coding
ENSDARG00000024894 (tbx5a)
T-box 5a 		ENSDART00000037681 (tbx5a-201) 75451438-75476894 protein_coding
ENSDART00000037691 (tbx5a-001) 75451438-75476894 protein_coding
ENSDART00000114947 (tbx5a-002) 75454973-75474627 processed_transcript
CIL_0004YZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018604-ENSMUSG00000018263 CGP 10090 5:119670669-119885218
GeneTranscriptPositionBiotype
ENSMUSG00000018263 (Tbx5)
T-box 5 		ENSMUST00000018407 (Tbx5-201) 119834663-119885218 protein_coding
ENSMUSG00000018604 (Tbx3)
T-box 3 		ENSMUST00000018748 (Tbx3-001) 119671018-119684724 protein_coding
ENSMUST00000079719 (Tbx3-201) 119670669-119684561 protein_coding
ENSMUST00000121021 (Tbx3-002) 119670862-119684724 protein_coding
ENSMUST00000145647 (Tbx3-003) 119675445-119680630 retained_intron
ENSMUST00000154680 (Tbx3-004) 119680249-119680832 processed_transcript
ENSMUSG00000086847 (Tbx3os2)
T-box 3, opposite strand 2 		ENSMUST00000135385 (Tbx3os2-001) 119685095-119691218 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004YZ_0001ENSDARG00000002216ENSDART00000006380ENSDARG00000024894ENSDART00000037681ENSDART00000037691ENSDART00000114947CIL_0004YZ_0002ENSMUSG00000018263ENSMUST00000018407ENSMUSG00000018604ENSMUST00000018748ENSMUST00000079719ENSMUST00000121021ENSMUST00000145647ENSMUST00000154680ENSMUSG00000086847ENSMUST00000135385
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004YZ_0001ENSDARG00000002216ENSDART00000006380ENSDARG00000024894ENSDART00000037681ENSDART00000037691ENSDART00000114947CIL_0004YZ_0002ENSMUSG00000018263ENSMUST00000018407ENSMUSG00000018604ENSMUST00000018748ENSMUST00000079719ENSMUST00000121021ENSMUSG00000086847ENSMUST00000135385
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000002216 ENSDART00000006380 N/A N/A N/A 1.268±0.75 N/A N/A 0.162±0.05 0.284±0.07 0.023±0.00 N/A 0.887±0.00 N/A N/A N/A
ENSDARG00000024894 ENSDART00000037681 N/A N/A N/A N/A N/A N/A 13.619±0.00 0.069±0.00 N/A N/A 0.051±0.00 N/A N/A N/A
ENSDART00000037691 N/A N/A N/A N/A N/A N/A 14.553±0.00 0.068±0.00 N/A N/A 0.051±0.00 N/A N/A N/A
ENSDART00000114947 N/A N/A N/A N/A N/A N/A N/A 0.084±0.00 0.057±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018263 ENSMUST00000018407 0.245±0.20 0.208±0.08 1.759±0.07 0.028±0.00 0.595±0.30 0.022±0.01 5.500±2.16 0.026±0.01 0.016±0.02 7.312±2.92 0.016±0.01 0.024±0.01 0.399±0.30 1.291±0.09
ENSMUSG00000018604 ENSMUST00000018748 1.862±1.35 66.346±2.15 5.464±1.04 0.061±0.00 3.623±1.99 1.795±0.70 0.603±0.14 0.700±0.10 1.929±1.63 7.618±1.70 0.719±0.03 7.121±3.03 1.500±0.47 0.233±0.11
ENSMUST00000079719 3.211±2.47 32.873±6.38 6.715±0.80 0.239±0.09 1.300±0.32 1.609±0.78 0.545±0.15 1.172±0.32 1.518±1.11 11.468±0.54 0.246±0.06 4.187±1.06 0.975±0.28 0.297±0.25
ENSMUST00000121021 2.151±1.34 27.049±3.37 7.280±0.19 0.296±0.14 3.380±0.96 1.439±0.39 0.745±0.31 0.934±0.55 0.253±0.08 6.640±2.51 0.616±0.22 7.439±2.66 2.896±1.46 0.208±0.12
ENSMUST00000145647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086847 ENSMUST00000135385 0.135±0.05 0.398±0.09 2.908±0.11 0.027±0.02 0.512±0.13 0.091±0.04 0.021±0.00 0.022±0.00 0.020±0.02 0.091±0.05 N/A 0.122±0.08 0.253±0.12 0.070±0.05

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